Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1165 ATGGAGGGAGGCGAGGATCTCCACCACCATCACCACCACCACCACCATCAGAACAGCAAAAAGCCTCCGCCAAAGCGCACCTCAACCAAGGACCAACACACGAAGGTGGACGGGCGCGGGCGGCGCATTCGAATGCCGACCCTCTGCGCTACCCGCGTCTTCCAACTCAACCGCGAGTTGGGCCACAAGTCAGACGACAAAACCATTGAGTGGCTCCTCCAGCAGGTGGAGCCTGCTATGATCGCCACCATTGGCACCGACACCATCCCCGCCAACTTCACCTCCCTGAACATCTCTATACGCAGTTCCGGCTCCTCCATGTTCGTCCCCTCCCAGCTCCGACCCTCCTACTTCAACCCCAATTTCTCCCTCCAACAACATCAACGAAGAACCTTCTTCCCCGACATAGCCTTTTCCTCTGACAATACCAATAACAACACATCAACACTTCTCAATTTCCAATCCAACACCCTCAACACCACCATGCTGCAACAGCAGGCCAAGCCGAAGCTTAGCGATGGCGGCGTGCCATCTTCCTTACATTTCAGACACCATTGTCTAATTTAA 567 0.5485 MEGGEDLHHHHHHHHHQNSKKPPPKRTSTKDQHTKVDGRGRRIRMPTLCATRVFQLNRELGHKSDDKTIEWLLQQVEPAMIATIGTDTIPANFTSLNISIRSSGSSMFVPSQLRPSYFNPNFSLQQHQRRTFFPDIAFSSDNTNNNTSTLLNFQSNTLNTTMLQQQAKPKLSDGGVPSSLHFRHHCLI* 189
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1165 188 ProSiteProfiles TCP domain profile. 29 83 IPR017887 -
Gso18g1165 188 MobiDBLite consensus disorder prediction 9 23 - -
Gso18g1165 188 MobiDBLite consensus disorder prediction 1 42 - -
Gso18g1165 188 MobiDBLite consensus disorder prediction 24 42 - -
Gso18g1165 188 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 17 175 - -
Gso18g1165 188 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 175 IPR005333 GO:0003700
Gso18g1165 188 Pfam TCP family transcription factor 27 155 IPR017887 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso18g1165 Gso-Chr18 22514796 22515362 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1165 20 98 TCP Transcription Factor Family AT1G69690 83.544 1.84e-43 145
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gso18g1165 TCP 4.3e-32 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1165 - - gsj:114397100 329.331