Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1158 ATGGATCTAGAACTCCCTGCTCATGCTGCAACTGTGAATGAATCTCAACAACAAAAGTTTGCTCTACCTGTGGATTCTGAAAACAAGGCAACTGTGTTCAGATTATTTTCCTTTGCCAAACCCCACATGAGAGCCTTTCACCTATCATGGGTCTCTTTCTTCGCATGCTTTGTGTCTAGCTTTGCTGCACCACCTCTTCTCCCCATAATCCGCGACAACCTCAACCTCACAGCCACTGACATTGGAAATGCCGGTGTGGCATCAGTCTCAGGTGCTGTCTTTGCAAGAATTGCAATGGGAACAGCCTGTGACTTGGTCGGACCGCGCCTCGCCTCTGCATCATTAATCCTCCTCACAGCACCATTTGTCTACTTCACTTCCATCATCAACTCAGCCACCTCTTATCTTCTAGTCCGGTTCTTCACCGGCTTCTCCCTCGCCACCTTTGTGTCCACGCAGTTCTGGATGAGCTCCATGTTCTCTGCTCCGGTGGTCGGTTCGGCCAACGGACTCTCCGGTGGATGGGGAAACCTTGGAGGAGGGGCTACCCAGCTCATCATGCCCCTTGTGTTCTCCCTCATCCGCGACATTGGGGCTACCAAATTCACCGCTTGGAGGATTGCATTCTTTGTCCCTGCCATGTTCCAAATGCTCACAGCATTCTCAATTCTGATATTTGGTCAGGACATGCCTGATGGGAACTTCCGCCGCTTGAAGAAGTCAGGGGAAAAAGCCAAAGATGATTTTTCAAGAGTCTTATATCATGGTGTTACAAACTATAGGGGATGGATTCTGGCGTTGACTTATGGATACTGCTTTGGGGTGGAGTTGACCATAGACAACATCATAGCTGAGTACTTCTATGACAGGTTTAATCTGAAACTCCACACTGCTGGAATCATTGCTGCAAGCTTTGGCTTGGCTAACATATTTTCTAGGCCTGGTGGGGGTTATATATCTGATGTAATGGCAAAGAGGTTTGGCATGAGGGGAAGATTGTGGGCTTTATGGATATGCCAAACCTTGGCTGGTGTTTTCTGCATAATTCTTGGCCTGGTGGGATCTCTAAGTGTATCCGTGGTTGTTATGATCATATTCTCTGTGTTCGTCCAAGCCGCGTGTGGAATGACCTTTGGGATTGTTCCTTTTGTCTCCAGAAGGTCATTAGGGGTCATATCTGGAATGACAGGAGGAGGAGGCAATGTGGGTGCAGTTGTGACCCAGTTAATTTTCTTCAAAGGATCCAAGTTTTCAAAAGAAAGAGGAATCACTCTAATGGGAGCCATGATCATAATATGCACCCTGCCAATATGTTTAATCTACTTTCCACAATGGGGTGGCATGTTTTCTGGTCCTTCATCTAAAAAAGTGACAGAAGAAGATTACTACTTGGCTGAGTGGAACTCAAAGGAGAAGGAGAAAGGCTCTCATCATGCAAGCTTGAAATTTGCTGATAACAGCAGAAGTGAAAGGGGCAGAAAACTGAATGCTTCGACCGAGCCTACTGAGGAAATCACACCCCCACATGTTTGA 1533 0.4697 MDLELPAHAATVNESQQQKFALPVDSENKATVFRLFSFAKPHMRAFHLSWVSFFACFVSSFAAPPLLPIIRDNLNLTATDIGNAGVASVSGAVFARIAMGTACDLVGPRLASASLILLTAPFVYFTSIINSATSYLLVRFFTGFSLATFVSTQFWMSSMFSAPVVGSANGLSGGWGNLGGGATQLIMPLVFSLIRDIGATKFTAWRIAFFVPAMFQMLTAFSILIFGQDMPDGNFRRLKKSGEKAKDDFSRVLYHGVTNYRGWILALTYGYCFGVELTIDNIIAEYFYDRFNLKLHTAGIIAASFGLANIFSRPGGGYISDVMAKRFGMRGRLWALWICQTLAGVFCIILGLVGSLSVSVVVMIIFSVFVQAACGMTFGIVPFVSRRSLGVISGMTGGGGNVGAVVTQLIFFKGSKFSKERGITLMGAMIIICTLPICLIYFPQWGGMFSGPSSKKVTEEDYYLAEWNSKEKEKGSHHASLKFADNSRSERGRKLNASTEPTEEITPPHV* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1158 510 Pfam Major Facilitator Superfamily 50 406 IPR011701 GO:0022857|GO:0055085
Gso18g1158 510 MobiDBLite consensus disorder prediction 470 498 - -
Gso18g1158 510 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 10 496 IPR044772 GO:0015112
Gso18g1158 510 PANTHER HIGH AFFINITY NITRATE TRANSPORTER-RELATED 10 496 - -
Gso18g1158 510 CDD MFS_NRT2_like 46 439 IPR044772 GO:0015112
Gso18g1158 510 Gene3D MFS general substrate transporter like domains 244 446 IPR036259 -
Gso18g1158 510 Gene3D MFS general substrate transporter like domains 37 234 IPR036259 -
Gso18g1158 510 SUPERFAMILY MFS general substrate transporter 37 443 IPR036259 -
Gso18g1158 510 MobiDBLite consensus disorder prediction 470 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1158 Gso-Chr18 21984210 21987330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1158 18 501 Inorganic Solute Cotransporters AT1G12940 75.413 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1158 K02575 - gmx:100787888 946.036