Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1157 ATGCCTTCTTTTTCCTTTCTGTTTCTCTTCCACTGTTCATTCTTCTTACCTTATGCCCTCTCCGACCCAAGAGCCCAGAGAGCCGCGCTGCTATGCACGAACCGCACCGTTTTATCCCTCTCCCGGCGCCAAGTCTTCATCGCGAACTTCCTGGCGGCGATGGACGCGCTGACGCCTCTCACCACCTCGCACGGCCACGGCGCCGTCTCCAACGGCTCCCAAAACGCCACCGTTTACGCCTTCGGCGAGTGCATGAGGGACCTCTCGCGGAACGACTGCAACTTGTGCCTGGCTCAGTGCAAGACGCAGCTCCTCGCCTGCCTCCCTTTCCAGAGAGGGACACGTGGCGGCCGCCTGTTCTTCGACGGCTGCTACCTCAGGTACGATGACTACAACTTCTTCGGCGAAACTCGAAGCGACCAAGATACCACCCTGTGTGGAAATAATAGTAATAACAACAATTCTAACAGTGTTGCTAATAGTGCTACTAATAGTAGTAGCGGTGTTTATAAGGCTAATGTTATGGCCTTGGTTCTGAACCTGAGCGAGTTGGCGCCGAAAAGCGATGGGTTTTTCGTGGGGTCTGTCGAGAGAAAGAACGTGCGTGTTTACGGGTTGGCTCAGTGCTGGGAGTATGTGAATGGCAGTGCTTGTGAGAGATGTTTGGCGGATGCTGTCACGAGGATTGGCTCGTGTGCCACGCAAGAAGCCAGGGTGTTGAATGCTGGTTGTTACTTGAGGTACTCTGCGCAGAAGTTTTATAACAATTCGAGCGTTGTGGCAACCGCTGGAAAACATGGAAAACGGAGACTAGCTAAAATTCTGGCTGCGTCTTCTGCTGCCTTGGCTCTTCTGCTGGTAATTGCAACAGTTGTTTTCTTTATAAGGAAGAATGTGGTGACAAGGAGAAGAGAAAGAAGACAGTTTGGTGCTCTTCTGGACTCAGTGAATAAGTCCAAGCTAAATATGCCTTACGAGGTTCTTGAAAAAGCAACAAATTACTTCAATGAGGCCAACAAGCTTGGACAAGGGGGATCAGGTTCTGTTTATAAAGGAGTTATGCCAGATGGAATTACCGTTGCAATAAAAAGGCTTAGCTTCAACACAACGCAATGGGCGGATCATTTCTTCAATGAGAGCCTCCATGATCACTTTTCTGTAAGAAGGACTTCTCAACCGCTGACTTGGGAAATCAGGCACAAAATTTTATCAGGAATTGCAGAGGGCATGGCCTACCTTCATGAGGAATCACATGTGAGAATCATTCATAGAGACATAAAATTGAGCAACATTCTGCTTGAGGAGGACTTTACACCCAAGATTGCTGATTTTGGACTTGCTAGATTATTTCCTGAAGACAAGTCTCACATTAGCACAGCCATTGCTGGCACACTGGGGTATATGGCTCCAGAGTATGTTGTTCGTGGGAAGTTGACTGAGAAAGCAGATGTTTACAGTTTTGGAGTTCTTGTTATTGAAATTGTATCTGGCAAAAAAATCAGTGCTTATATTATGAATTCGTCCTCTCTCCTACATACGGTTTGGAGCCTCTATGGATCAAATAGGCTATCTGAAGTTGTTGATCCGACCCTAGAGGGTGCTTTTCCCGCAGAGGGAGCATGCCAACTGCTTCAGATAGGGTTACTTTGTGCACAAGCATCTGCAGAGTTGAGACCATCAATGTCAGTAGTAGTTAAAATGGTTAATAACGATCACGAAATTCCTCAGCCAACACAACCGCCGTTCATGAATTCCGGTAGTTCAGAATTTGGCAAATCTGGTTTACCTGGATATAATTTTCAGCCTGGATCCAACACTCAGTCTTCAGGGAACACCATAAGTGAAAGTGAGATTGAGCCTAGATAA 1866 0.4721 MPSFSFLFLFHCSFFLPYALSDPRAQRAALLCTNRTVLSLSRRQVFIANFLAAMDALTPLTTSHGHGAVSNGSQNATVYAFGECMRDLSRNDCNLCLAQCKTQLLACLPFQRGTRGGRLFFDGCYLRYDDYNFFGETRSDQDTTLCGNNSNNNNSNSVANSATNSSSGVYKANVMALVLNLSELAPKSDGFFVGSVERKNVRVYGLAQCWEYVNGSACERCLADAVTRIGSCATQEARVLNAGCYLRYSAQKFYNNSSVVATAGKHGKRRLAKILAASSAALALLLVIATVVFFIRKNVVTRRRERRQFGALLDSVNKSKLNMPYEVLEKATNYFNEANKLGQGGSGSVYKGVMPDGITVAIKRLSFNTTQWADHFFNESLHDHFSVRRTSQPLTWEIRHKILSGIAEGMAYLHEESHVRIIHRDIKLSNILLEEDFTPKIADFGLARLFPEDKSHISTAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLVIEIVSGKKISAYIMNSSSLLHTVWSLYGSNRLSEVVDPTLEGAFPAEGACQLLQIGLLCAQASAELRPSMSVVVKMVNNDHEIPQPTQPPFMNSGSSEFGKSGLPGYNFQPGSNTQSSGNTISESEIEPR* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1157 621 ProSiteProfiles Gnk2-homologous domain profile. 25 133 IPR002902 -
Gso18g1157 621 MobiDBLite consensus disorder prediction 575 621 - -
Gso18g1157 621 Gene3D - 150 253 IPR038408 -
Gso18g1157 621 Gene3D - 28 133 IPR038408 -
Gso18g1157 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Gso18g1157 621 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 378 607 - -
Gso18g1157 621 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 16 379 - -
Gso18g1157 621 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 378 607 - -
Gso18g1157 621 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 16 379 - -
Gso18g1157 621 SUPERFAMILY Protein kinase-like (PK-like) 320 585 IPR011009 -
Gso18g1157 621 Gene3D Phosphorylase Kinase; domain 1 313 381 - -
Gso18g1157 621 ProSiteProfiles Gnk2-homologous domain profile. 152 253 IPR002902 -
Gso18g1157 621 Pfam Protein kinase domain 379 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1157 621 Pfam Salt stress response/antifungal 162 250 IPR002902 -
Gso18g1157 621 Pfam Salt stress response/antifungal 41 131 IPR002902 -
Gso18g1157 621 SMART serkin_6 335 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1157 621 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Gso18g1157 621 ProSiteProfiles Protein kinase domain profile. 260 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1157 621 Gene3D Transferase(Phosphotransferase) domain 1 382 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1157 Gso-Chr18 21969566 21973687 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1157 19 465 Receptor kinase-like Gene Family AT1G70530 51.967 8.71e-176 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso18g1157 Pkinase 4.1e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1157 - - gmx:100787359 1142.87