Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1101 ATGGATCTGGACCGTGGGATTGTTCAGAACTCTGATAAGAGGAAAGAATCATGGAAAACGGTGTTAACTCTGGCATATCAGAGTCTTGGAGTAGTGTATGGAGAGATTAGCACTTCACCACTCTACGTGTACAGGAACACATTTGCTGAAGACATTGGTCACTCAGAGACCAATGAAGAGATTTATGGTGTTTTGTCTTTGGTATTCTGGACTCTCACATTGGTGCCTTTGGTGAAGTATGTGTTCATAGTGCTGAAAGCTGATGACAATGGTGAAGGTGGCACGTTCGCACTGTATTCTTTGCTGTGTCGCCATGCCAAGGTTGGCTTGTTGCCTAATTGCCAATTGGCCGATGAGGAGCTCTCGGAGTACAAAAAGCACAGCTGTGGCATGGCACCGGAGAGAAGCCTTGCCTTCAGGCTCAAGTCCTTGTTGGAGAGGCACAAGGTCTTGCAGAGGATTTTGCTGGTTCTGGCTTTGTTAGGGACTTGCATGGTGATTGGTGTTGGAGTCCTTAAACCTACTATTTCTGTTTTCTCAGCAGTGTCTGGCCTTGAGCTTTCAATGTCCAAGGAGCATCACAGATATGTAGAAGTTCCAGGTGCCTGCATCATATTGATAGGCTTGTTTGCCCTTCAACGTTATGGCACAGACAAGGTTGGCTTCTTGTTTGCCCCCATAGTTTGCATATGGCTCTTCTGCATCAGTGCCATTGGTATATATAATATCTTTTACTGGAACCCTCATGTGTACCAAGCACTCTCTCCATATTATGTTTTTCAATTTTTAAAGAAGACTAGAAGAGGAGGTTGGATGGCCCTTTGTGGAATTTTGTTGTGCATAACAGGATCAGAAGCCATGTTTGCTGGTCTTGGGCACTTTTCCCAGCTATCAATCAAGATTGCTTTCACCTCTTTGGTCTATCCATCTTTAATCCTCGCGTATATGGGGCAAGCTGCTTATTTTTCTAGACATCATGATGTTGAGCAAGAGTACCACTTTGGCTTTTATGTATCTGTACCAGAGAAGTTGAGATGGCCTGTTCTTGTGATAGCCATACTTGCTGCGGTTGTGGGAAGCCAATCCATCATCACTGGAACTTTCTCAATCATCAGGCAATGCTCTGCATTAAGTTGCTTTCCTAGAGTTAAAGTGGTTCACACTTCATCCAAAATCCATGGACAAGTATATATCCCTGAGATCAACTGGTTGTTGATGCTCTTGTGTTTGGCTGTAACTATTGGTTTTAGAGACACAAAGCTTATGGGTAATGCATCAGGTTTGGCAGTAGTCTCAGTGATGCTGGTCACCTCATGTTTGATGTCACTGGTTATTGTAATCTGCTGGCACAAGAATGTTATGCTTGCAATTGGGTTTGTTCTCTTCTTTGGCACCATTGAGGCCCTCTTCTTCTCAGCTTCTGTGATCAAGTTCTTCGAAGGAGCGTGGGTGCCGGTTGCTTTGGCATTTGTGTTTCTGTCAGTCATGTGTGTGTGGCACTATGGCACTCTCAAGAAGTATGAATTTGATGTCCAAAACAAGGTTTCACTTAGCTGGTTACTCAGCCTTGGCCCTACCTTAGGCTTTGCAAGAGTACGCGGGATTGGCCTTGTGCACACTGAGCTAGTGTCTGGAATCCCTGCCATTTTCTCCCACTTTGTGACCAACCTACCAGCATTCCACCAAATCCTTGTCTTCCTATGCATCAAACATGTGCCAGTTCCACATGTTAGGCCTGAGGAAAGGTTCCTAGTTGGTCGTGTCGGTCCAAGAGACTTCAGAGTTTACAGGTGCATAGTGAGGTATGGATACCATGATGTCCACAAAGATGATGATGAGTTTGAGAAAGACCTTGTGTGCAGCATAGCGAAGTTCATTCAAGCAGGAAGTGGTGGTGGATGCAATAACTCGTCAAATGATGAGCCTGAAAAGGGTGGTGGCAAAATGACAGTTGTTGGAACCTGTTCTAGTACTAGCCACCACCCCATTTTGGTTAGTGAGAATGCTCATGAGGTTAATCATGTGGACAAAGCTGAGACATCATCAGAGTCACACAAGGTGGTCAAACCAAAGAAAAAGGTTAGGTTTATTGTGCCTGAGAGTCCAAAGATTGACACTGGTGCAATGGAGGAGTTGAAAGAATTAATGCAAGCCAGGGAAGTTGGGGTGGCCTACATTATAGGACAGTCCTACATGAGAGCCAAACCAGGGTCCAGCATGTTGAAGAAGTTGGCCATTAATTTAGGGTATGAATTCTTAAGAAAGAATAGTAGAGAGCCCTCCTATGAACTTAGTGCTCCCCATGCATCCTCTTTGGAGGTTGGGATGATGTACCAAGTTTAA 2343 0.4469 MDLDRGIVQNSDKRKESWKTVLTLAYQSLGVVYGEISTSPLYVYRNTFAEDIGHSETNEEIYGVLSLVFWTLTLVPLVKYVFIVLKADDNGEGGTFALYSLLCRHAKVGLLPNCQLADEELSEYKKHSCGMAPERSLAFRLKSLLERHKVLQRILLVLALLGTCMVIGVGVLKPTISVFSAVSGLELSMSKEHHRYVEVPGACIILIGLFALQRYGTDKVGFLFAPIVCIWLFCISAIGIYNIFYWNPHVYQALSPYYVFQFLKKTRRGGWMALCGILLCITGSEAMFAGLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYFSRHHDVEQEYHFGFYVSVPEKLRWPVLVIAILAAVVGSQSIITGTFSIIRQCSALSCFPRVKVVHTSSKIHGQVYIPEINWLLMLLCLAVTIGFRDTKLMGNASGLAVVSVMLVTSCLMSLVIVICWHKNVMLAIGFVLFFGTIEALFFSASVIKFFEGAWVPVALAFVFLSVMCVWHYGTLKKYEFDVQNKVSLSWLLSLGPTLGFARVRGIGLVHTELVSGIPAIFSHFVTNLPAFHQILVFLCIKHVPVPHVRPEERFLVGRVGPRDFRVYRCIVRYGYHDVHKDDDEFEKDLVCSIAKFIQAGSGGGCNNSSNDEPEKGGGKMTVVGTCSSTSHHPILVSENAHEVNHVDKAETSSESHKVVKPKKKVRFIVPESPKIDTGAMEELKELMQAREVGVAYIIGQSYMRAKPGSSMLKKLAINLGYEFLRKNSREPSYELSAPHASSLEVGMMYQV* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1101 780 PANTHER POTASSIUM TRANSPORTER 6 1 780 - -
Gso18g1101 780 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 780 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gso18g1101 780 Pfam K+ potassium transporter 26 606 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gso18g1101 780 TIGRFAM kup: potassium uptake protein 24 780 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1101 Gso-Chr18 19953591 19959677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1101 1 780 Inorganic Solute Cotransporters AT1G70300 71.338 0.0 1162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1101 K03549 - gmx:100784861 1536.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0282 1 3344465 3350386 Gso18g1101 18 19953591 19959677 PCT
Gso2g0280 2 3038344 3044104 Gso18g1101 18 19953591 19959677 PCT