Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1064 ATGGCTTTGAACACGATGATGCTTCAATCATGGCCTTTTATGAGCCTTGTTTTTGTTTTACTTTTGCACAGTTTGTCAATAACACCATATTGTCATTGCCAAACCAGCAATTCTCCTCCTCAAAACATTGAAACTTTCTATCCTAATGGAACTTCAGCAACACAACAACCTTTGCCGCCACCACCACAGCCACAACAACCACCGCCACTTCCAACCGCTAACGTAGCACCTAGCCGCGGTTCATTGAACCATAACATAGCGACCGCGGTGGCTGCAACTGCGGCCAGCACCATAGTTGTTTGTGGTTTAATTTTCTTTTTGGTTCAAAGGTGCTTGAGGAAGAGAAGGAGAAGGAGAGAGGAGACAAGAAGTAACACTGCAACTGCTGATGGAGATACCCGAGTTGTGCCTCAGGGAAATGTGTTTGAGAGAATTGATGGGAATGTGAGGGGGTTGATCGTTGATGAGGATGGTTTGGATGTGATTTATTGGAGAAAGCTTGAAGGGAAGAACTCTAACAAGGATCTTCTACATAAGGAGGTTGTGAGTAGTCCTAGAAACAAAGAAAAAGCAGAACATGGTCATGATGAAAATCAAGTGAAGAAATCCAAGTCCATCCAAGTGGTTCCTCTGCTTAGAGGAAAATCTTCAACTTCTCACTTGAATGTATCTCCAGAAGAGGATGAGCCATATAGATTTTCGCCGCTTCCATCTCCTACTCCTTCAAGTCTTCCTGCATCAGCTGGGATTGTTATCAAGGATGTTCAGAAACCAGATTCTCCAACTCAACCATCAACTCCACCCCCTCCAATTTCACCCTCAACTCCATCATCCTCTGCTTCTTTTGCAGCAATTCCGAAAACGAATACTCCTGCACCGTCGCCTCCCCCTCTCCCAATCTCAGCTAGAAGGAGTCCAGCACCACCTCCTCCTCCTCCAGCATCATCAAAACCACCACCTGCTCCAATTGAAATGACAGCTATTAAGCAAAGAAACTCTTCAGGGAAAGGCATGCCAGAAACCAGCAATGATCAAGTGAAGCTGAAGCCTTTGCATTGGGATAAGGTGAATAGTAATAATGCTGATCACTCCATAGTTTGGGACAAAGTCGATCGTGGCTCTTTCAGGGTTGATCAAGATCTTATGGAAGCTCTCTTTGGTTATGTCGCAACCAACCGAAGATCTCCCAAAGGAAAGAGTCACTCAGCCATTCCCAGCAAGGATGGCTCAGCTTCTTCAGCAAAAACATTTCTTCTTGACCCTAGAAAATCACAGAACATTGCTATTGTTTTGAAATCTCTTGCAGTCTCACAAGGCGAAATTCTTGATACACTCATTGATGGTAAGGGCCTCAATGCAGATACCCTTGAAAAGCTTGCTAGAGTTTCCCCAACAGAAGAAGAGCAATCTCTTATCCTTCAATACAAAGGAGACCCAGCAAGACTTGCAGCAGCTGAATCATTCCTCTATAGCATCCTTAAAGCTGTTCCCTCGGCTTTCAAGCGCTTGAATGCCATGCTATTCAGGTTGAACTATGACTCAGAGATTCAAGAAATCAAGGAATCTCTGCAGACCATTGAACTGGGGTGTAACGAGCTTAAAAGCAAAGGACTCTTTGTGAAGCTTCTTGAAGCAGTGCTTAAGGCAGGAAATCGAATGAATGCAGGAACTGCAAGAGGTAATGCTCAAGCTTTTTTCAATTTGGCTTCTCTAAGGAAGCTCTCTGATGTCAAGACCACCAATGGAAGAACGACATTACTTCACTTTGTGGTTGAAGAGGTAGTCCGTTTGGAGGGAAAACGGGTTTCTCTTAACCGCAATGGCAGCCTGAGCAGTAGCAGCAGTAGGAGCAACAGCAACAGCAATGGAAACTATGAGAACAACATTGCTTCAAATGAACTGATAGAAAGGGAATATGTAACATTAGGATTGCCAATTGTAGGAGGGATCAATTCTGAGTTATCCAATGTTAAGAAAGCAGCACAAATAGATTATAACAATTTAGTTGGTTCAATCTCGGCCCTCTCAACCCGGTTAGTTGAAATTCGAGAACTTGCTTCCTTGTGTGGAAATGGAGGAAATTTTGTGAAAGAAATGGATCATTTTCTGGGAAATGCAGAGGATGAGTTGAAATTAGTGAGGGACAAGCAAACAAGTGTGTTTCAGCTCATCAAGAAAACAACACAATACTATCAAGGAGGAGCCTCAAAAGAGACTGCAGAAGACAATCTTCAATTGTTTGTCATAGTGAAGGATTTCCTGGGAATGGTTGATCAAACTTGCACTGAGATTGCACGTGAGCATCAGAAGAGGAAACCTCCCAAGGCAATTTTTGGGTAG 2340 0.4355 MALNTMMLQSWPFMSLVFVLLLHSLSITPYCHCQTSNSPPQNIETFYPNGTSATQQPLPPPPQPQQPPPLPTANVAPSRGSLNHNIATAVAATAASTIVVCGLIFFLVQRCLRKRRRRREETRSNTATADGDTRVVPQGNVFERIDGNVRGLIVDEDGLDVIYWRKLEGKNSNKDLLHKEVVSSPRNKEKAEHGHDENQVKKSKSIQVVPLLRGKSSTSHLNVSPEEDEPYRFSPLPSPTPSSLPASAGIVIKDVQKPDSPTQPSTPPPPISPSTPSSSASFAAIPKTNTPAPSPPPLPISARRSPAPPPPPPASSKPPPAPIEMTAIKQRNSSGKGMPETSNDQVKLKPLHWDKVNSNNADHSIVWDKVDRGSFRVDQDLMEALFGYVATNRRSPKGKSHSAIPSKDGSASSAKTFLLDPRKSQNIAIVLKSLAVSQGEILDTLIDGKGLNADTLEKLARVSPTEEEQSLILQYKGDPARLAAAESFLYSILKAVPSAFKRLNAMLFRLNYDSEIQEIKESLQTIELGCNELKSKGLFVKLLEAVLKAGNRMNAGTARGNAQAFFNLASLRKLSDVKTTNGRTTLLHFVVEEVVRLEGKRVSLNRNGSLSSSSSRSNSNSNGNYENNIASNELIEREYVTLGLPIVGGINSELSNVKKAAQIDYNNLVGSISALSTRLVEIRELASLCGNGGNFVKEMDHFLGNAEDELKLVRDKQTSVFQLIKKTTQYYQGGASKETAEDNLQLFVIVKDFLGMVDQTCTEIAREHQKRKPPKAIFG* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1064 779 MobiDBLite consensus disorder prediction 178 323 - -
Gso18g1064 779 Coils Coil 516 536 - -
Gso18g1064 779 MobiDBLite consensus disorder prediction 289 320 - -
Gso18g1064 779 MobiDBLite consensus disorder prediction 210 224 - -
Gso18g1064 779 SUPERFAMILY Formin homology 2 domain (FH2 domain) 308 772 - -
Gso18g1064 779 SMART it6_source 335 772 IPR015425 -
Gso18g1064 779 MobiDBLite consensus disorder prediction 41 77 - -
Gso18g1064 779 PANTHER FORMIN-LIKE PROTEIN 1 776 - -
Gso18g1064 779 ProSiteProfiles Formin homology-2 (FH2) domain profile. 338 779 IPR015425 -
Gso18g1064 779 MobiDBLite consensus disorder prediction 54 74 - -
Gso18g1064 779 MobiDBLite consensus disorder prediction 606 625 - -
Gso18g1064 779 Gene3D Formin, FH2 domain 357 776 IPR042201 -
Gso18g1064 779 MobiDBLite consensus disorder prediction 178 202 - -
Gso18g1064 779 Pfam Formin Homology 2 Domain 342 757 IPR015425 -
Gso18g1064 779 PANTHER FORMIN-RELATED 1 776 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gso18g1064 779 MobiDBLite consensus disorder prediction 261 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1064 Gso-Chr18 18225583 18228353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1064 314 772 FH2 protein (formin) Gene Family AT1G70140 54.447 1.02e-160 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1064 - - gmx:100781860 1278.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0324 1 4010690 4013818 Gso18g1064 18 18225583 18228353 PCT
Gso2g0230 2 2426438 2429651 Gso18g1064 18 18225583 18228353 PCT
Gso18g1064 18 18225583 18228353 Gso1g0324 1 4010690 4013818 PCT
Gso18g1064 18 18225583 18228353 Gso2g0230 2 2426438 2429651 PCT