Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1042 ATGAAGGGATGGGATGGGATTCAATCTTCGTTCTCTTCTCGATCGAGTTCCACGTTGGGCCAACAACAACAACAACCTCCCTCGCGAACGGTTCGACTCGGCCGAGTTCAGCCTCAGGCTCCGACTCACCGCACCATCTTCTGCAACGATCGCGAGGCCAATCTTCCCATCCGATTCAAGGGGAATTCTATATCAACTACGAAATATAACTTCTTCACCTTTTTGCCAAAAGGATTATTTGAACAGTTCAGACGGGTGGCCAATCTCTACTTTCTTATGATCTCAATTTTGTCAACCACACCAATTAGTCCTGTGTCTCCAATAACTAATGTGCTTCCTCTATCTCTGGTGCTTCTTGTCTCTCTTATTAAGGAAGCTTTTGAGGACTGGAAGCGTTTTCAAAATGACATGTCTGTAAACAATAATACAATAGATGTTTTGCAAGATCAAAAGTGGGGGTCTATACCCTGGAAAAAGTTGCAGGTTGGAGACCTTGTTAAGGTTAAGCAGGATGCATTCTTTCCTGCAGATCTGCTTTTCTTGGCTAGCACTAATGCAGATGGTGTCTGCTACATTGAGACTGCTAATTTGGATGGGGAAACAAATTTGAAGATTAGGAAAGCATTGGAAAAGACTTGGGATTACGTGACTCCAGAGAAGGCATCTGAGTTTAAAGGTGAAATTCAATGTGAACAACCAAACAATTCATTGTATACCTTTACTGGAAATCTTATAACTCAAAAGCAAACACTGCCTCTCAGTCCAAATCAAATTTTGTTGCGGGGTTGCAGTCTCAGGAATACAGAGTATATTGTTGGGGTTGTTATATTTACAGGACATGAAACAAAGGTGATGATGAATACAATGAATGTTCCTTCCAAAAGAAGTACATTGGAGAGGAAACTTGACAAGCTCATACTAACTCTATTTGCAACTCTCTTTGTGATGTGTTTCATTGGAGCCGTAGGCAGTGCTATCTTCGTAAACAAAAAATATTTTTACTTACATCTTGATTCATCAGAGGAGGGCTCAGCACAGTTCAACCCCAAAAACAGATTTTTGGTTTTTCTCCTAACTATGTTTACCCTAATCACACTATACTCGACTATCATTCCCATTTCACTTTATGTGTCCATAGAGATGATAAAATTTATTCAGTCAACTCAATTTATCAACAAGGACTTGTGCATGTACCATAATGAAACCAATACACCTGCATTGGCCAGAACTTCAAATCTGAATGAAGAACTTGGGCAGGTGGAATACATTTTCTCTGACAAAACTGGGACTCTGACAAGAAATTTGATGGAGTTCTTTAAGTGTTCAATTGGAGGAGAGGTCTATGGAAATGGTGTGACTGAAATTGAGAGAGGATTAGCAGAGCGTAATGGAATGAAGATTGAGGAAAATAGATCTCCCAATGCAGTGCACGAGAGGGGTTTTAATTTTGATGATGCTAGGATTATGAGAGGAGCTTGGAGGAATGAACCAAATCCTGATGTCTGCAAGGAATTCTTCAGATGCCTTGCTATATGCCATACTGTACTGCCTGAGGGTGATGAGTCCCCTGAAAAGATCAGATATCAAGCTGCATCACCAGATGAGGCTGCTTTGGTTATTGCTGCAAAACACTTTGGTTTCTTTTTCTACAGACGCACACCTACAATGATATATGTTCGTGAATCTCATGTTGAGAAAATGGGCAAAGTTCAAGATGTGTCTTATGAGATTTTAAATGTGCTCGAGTTTAATAGTACAAGGAAGCGTCAGTCTGTTGTTTGTCGTTATCCTGATGGAAGGCTTGTACTATACTGTAAGGGTGCTGATAATGTAGTCTATGAGAGACTAGCTGATGGTAATAATAATATCAAGAAAGTCACCAGGGAGCATTTGGAACAATTTGGATCTGCTGGATTACGCACCTTATGCCTAGCCTACAAAGAATTGCATCCTGATGTTTATGAAAGCTGGAATGAGAAGTTTATCCAGGCCAAGTCTTCTCTAAATGATCGTGAAAAGAAATTGGATGAGGTGGCAGAACTTATTGAAAATGATCTCATTTTAATTGGTAGCACAGCCATTGAAGACAAGCTTCAAGAGGGAGTACCAGCTTGCATAGAGACTCTGCAAAGAGCTGGTATTAAAATTTGGGTTCTTACAGGGGACAAGATTGAAACAGCGATAAACATAGCCTATGCATGCAACTTGATAAACAATGAGATGAAGCAATTTGTTATTAGTTCAGAAACTGATGCAATTAGAGAAGTTGAAGACAGGGGTGACCAAGTGGAAATTGCACGGTTTATTAAAGAAGAAGTGAAAAGAGAACTGAAGAAATGCCTCGAGGAAGCACAGAGCTCTTTTCAGTCCCTATCTGGACCAAAATTAGCACTTGTAATTGATGGAAAATGTCTAATGTATGCATTGGATCCAAGTTTGAGAGTGATGCTGCTGAATCTAAGTTTGAATTGTCACGCTGTAGTTTGCTGCCGAGTTTCTCCTTTACAGAAAGCACAGGTCACGAGTATGGTCAAGAAAGGTGCACAAAAAATTACACTTAGTATTGGTGATGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGCGTTGGCATAAGTGGGATGGAGGGAATGCAAGCTGTGATGGCCAGCGATTTTGCCATTGCACAGTTCCGTTACCTTGCAGATTTGCTTCTTGTTCATGGCCGATGGTCATATTTGCGAATATGCAAGGTTGTGATATACTTCTTTTACAAGAACCTCACCTTCACTCTTACTCAGTTTTGGTTTACATTTCAAACTGGGTTTTCTGGTCAGAGATTCTATGATGATTGGTTTCAGTCATTATATAATGTTATCTTCACAGCACTTCCTGTAATCATTGTTGGATTATTTGACAAGGATGTCAGTTCATCTCTATCCAAGAAATATCCTGAACTATACATGGAAGGAATAAGAAATGTTTTCTTCAAATGGAAAGTTGTGGCCATATGGGCTTTCTTTTCTGTATACCAGTCTCTAATATTCTTCTATTTTGTGAGTACTACAAATTTAAGTGCTAAAAACTCAGCAGGCAAGGTATTTGGACTCTGGGATGTCAGTACAATGGCCTTCACTTGTGTTGTAATAACCGTCAACTTGCGACTGCTTATGATTTGTAATTCGATCACTAGATGGCACTATATTAGTGTTGGTGGAAGTATATTAGCCTGGTTTATTTTTATTTTTATATATTCAGGGATTAGCACTCCTTATGATCGTCAGGAGAATATTTATTTTGTCATATATGTCTTGATGAGTACATTCTACTTCTATGTCATGCTACTTCTAGTTCCTATTGCTGCACTTTTCTGTGACTTTGTTTACCAAGGGGTTCAAAGATGGTTCTTCCCCTATGATTATCAGATTATTCAAGAAATGCATAGAGATGAGGTAGATAGCACTGGTAGAGCACAGCTGCTGGAGATAGGGAACCAGCTTACACCAGCTGAGGCAAGGAGTCATGCTATATCTCAACTCCCACGCGAAATATCAAAGCACACTGGGTTTGCTTTTGATTCACCTGGGTATGAATCCTTTTTTGCCTCACAGCTCGGTGTATATGCTCCACCCAAGGCATGGGATGTAGCAAGAAGAGCTAGCATGAGATCACGGCCAAAGATTGGGCAGCAAAAATAA 3684 0.3998 MKGWDGIQSSFSSRSSSTLGQQQQQPPSRTVRLGRVQPQAPTHRTIFCNDREANLPIRFKGNSISTTKYNFFTFLPKGLFEQFRRVANLYFLMISILSTTPISPVSPITNVLPLSLVLLVSLIKEAFEDWKRFQNDMSVNNNTIDVLQDQKWGSIPWKKLQVGDLVKVKQDAFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALEKTWDYVTPEKASEFKGEIQCEQPNNSLYTFTGNLITQKQTLPLSPNQILLRGCSLRNTEYIVGVVIFTGHETKVMMNTMNVPSKRSTLERKLDKLILTLFATLFVMCFIGAVGSAIFVNKKYFYLHLDSSEEGSAQFNPKNRFLVFLLTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLCMYHNETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGNGVTEIERGLAERNGMKIEENRSPNAVHERGFNFDDARIMRGAWRNEPNPDVCKEFFRCLAICHTVLPEGDESPEKIRYQAASPDEAALVIAAKHFGFFFYRRTPTMIYVRESHVEKMGKVQDVSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADNVVYERLADGNNNIKKVTREHLEQFGSAGLRTLCLAYKELHPDVYESWNEKFIQAKSSLNDREKKLDEVAELIENDLILIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFVISSETDAIREVEDRGDQVEIARFIKEEVKRELKKCLEEAQSSFQSLSGPKLALVIDGKCLMYALDPSLRVMLLNLSLNCHAVVCCRVSPLQKAQVTSMVKKGAQKITLSIGDGANDVSMIQAAHVGVGISGMEGMQAVMASDFAIAQFRYLADLLLVHGRWSYLRICKVVIYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSSSLSKKYPELYMEGIRNVFFKWKVVAIWAFFSVYQSLIFFYFVSTTNLSAKNSAGKVFGLWDVSTMAFTCVVITVNLRLLMICNSITRWHYISVGGSILAWFIFIFIYSGISTPYDRQENIYFVIYVLMSTFYFYVMLLLVPIAALFCDFVYQGVQRWFFPYDYQIIQEMHRDEVDSTGRAQLLEIGNQLTPAEARSHAISQLPREISKHTGFAFDSPGYESFFASQLGVYAPPKAWDVARRASMRSRPKIGQQK* 1228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1042 1227 CDD P-type_ATPase_APLT_Dnf-like 61 1015 - -
Gso18g1042 1227 SUPERFAMILY HAD-like 412 897 IPR036412 -
Gso18g1042 1227 Pfam Phospholipid-translocating ATPase N-terminal 46 110 IPR032631 -
Gso18g1042 1227 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 25 1223 - -
Gso18g1042 1227 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 430 702 IPR023299 GO:0000166
Gso18g1042 1227 SUPERFAMILY Calcium ATPase, transduction domain A 141 285 IPR008250 -
Gso18g1042 1227 Gene3D - 688 895 IPR023214 -
Gso18g1042 1227 MobiDBLite consensus disorder prediction 1 38 - -
Gso18g1042 1227 Gene3D - 124 289 - -
Gso18g1042 1227 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 25 1223 - -
Gso18g1042 1227 SFLD C1.7: P-type atpase like 406 906 - -
Gso18g1042 1227 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 59 1141 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Gso18g1042 1227 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Gso18g1042 1227 Pfam Phospholipid-translocating P-type ATPase C-terminal 883 1133 IPR032630 -
Gso18g1042 1227 Pfam Cation transport ATPase (P-type) 521 615 - -
Gso18g1042 1227 SUPERFAMILY Calcium ATPase, transmembrane domain M 58 1133 IPR023298 -
Gso18g1042 1227 SFLD p-type atpase 406 906 IPR044492 -
Gso18g1042 1227 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 828 934 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gso18g1042 1227 MobiDBLite consensus disorder prediction 1 32 - -
Gso18g1042 1227 Pfam E1-E2 ATPase 140 380 - -
Gso18g1042 1227 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Gso18g1042 1227 PRINTS P-type cation-transporting ATPase superfamily signature 855 874 - -
Gso18g1042 1227 Gene3D - 553 687 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1042 Gso-Chr18 17407535 17464311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1042 10 1226 Primary Pumps ATPases AT1G59820 79.803 0.0 2083
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1042 K14802 - gmx:100815547 2416.34