Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1012 ATGCCAAAAAGAAATTGTATCTATTTTTGGAAAGAATACTCTATGGAAGCTAAGCAGAGTGAAGAAATTAATGGCAACAAGGATCATAATAAGCTTAAAAGGGAAATGGGAGAGGTTGGAGAAGGAAACGATAACTTGAAACTTTCATTGGCAAAGCTTGTAAAGGATTCAACTAGCGATGAAGAAAGTGAACTTGTTTCCCTTTCTCTTGGAATTTCATCCACAGGCCAACATGAGATGAAGAAAAAGAAGAATAGAAATGAAAAGATGAGAGAAAATGAGGATTTGAAAGATATACTTGCACTTGGATTAGATATCAGATTTGACTCTTCAGCTATAAAAAATCTAAGCCATGAAAGTAGTTGTGATGGGGAAAGGAAGGAAGAGGAACTTTCAGAGACATGGCCACCAAGTAAAGTTGTCAAGACAATTATGAGAACTAGAGATAAAAGTGAAGTTTCTCAACATGCTGAACTCAAGAAGGCCAGGGTTTGTATCAGAGCGAGATGTGATACCCTAACGGTTCAAAGATGTGCTGAAGACATGTCAATCTTGATTACCACCTATGAAGGAACTCACAACCACCCACTTCCTACTTCAGCCACTACCATAGCCTACACAACTTCTGCAGCAGCTTCCATGCTTCAGTCTCCTTCATTGAGCTCACAACTAGGACCAGCCAATTCAGATACGGTCCCTCTCATCAATTCTAGCGTTGCTTATAACCTTAATGCCCTAAACTTCACATCATCAAGCTATGATCAGCAGTTTTCAAAATCATCACAACACTTGTACTTCCACAACTCATCTATTTCAACCTCTAATTCTCACCCCACAATCACTCTTGACCTCACCTCACCTCAAACTTCACCTCATGTTGGAAAGTTCACCCCAGGCTTGTCTTTCATACCAAAACATTCATCAACAAATCTTCATTTTTCCTCAAGTACTTTCTCTCCTTTGCAATCAAGCATGCTACAGTCACCTTGGAGTCCTTATGGTGATTGCTTCAACTATGAGGGATTGATCACCCAAAATAGTAACCAAAATGGTTTCCTTACTAAGACTGGAAAACAACCATTTCAGGGGCATCTTTATCAACCCAATTACATTAGCAACCGTGTCATTTCTCAACAACCTTTACCTGATTCTGTTGTAGCTGCAACCAAGGCAATCACGGCTACCCCAAAATTTCAATCTGCAATAGCAGCTGCACTCACAGCATATGTTGGTAATGGGGTTAGAGAAAATCATGTTGGGGCTGAAAGTGCAGGTTTGGACTTAAATCTAGGTGGAGATATGCCATACACAACGAAGAAGGCAGATTACACTTCTAATGCATCAAGGTACAAGAGAATGTCATCTTCTGCTCCTACTGCTCCAAAAAGAAATTTGGTCATATCTCAACCATTACAAGCATCTAAAAGCTCCTTTGGATCGTCGTCTCTTAAAAGTAACCAATTCATAGACCAATAG 1476 0.3977 MPKRNCIYFWKEYSMEAKQSEEINGNKDHNKLKREMGEVGEGNDNLKLSLAKLVKDSTSDEESELVSLSLGISSTGQHEMKKKKNRNEKMRENEDLKDILALGLDIRFDSSAIKNLSHESSCDGERKEEELSETWPPSKVVKTIMRTRDKSEVSQHAELKKARVCIRARCDTLTVQRCAEDMSILITTYEGTHNHPLPTSATTIAYTTSAAASMLQSPSLSSQLGPANSDTVPLINSSVAYNLNALNFTSSSYDQQFSKSSQHLYFHNSSISTSNSHPTITLDLTSPQTSPHVGKFTPGLSFIPKHSSTNLHFSSSTFSPLQSSMLQSPWSPYGDCFNYEGLITQNSNQNGFLTKTGKQPFQGHLYQPNYISNRVISQQPLPDSVVAATKAITATPKFQSAIAAALTAYVGNGVRENHVGAESAGLDLNLGGDMPYTTKKADYTSNASRYKRMSSSAPTAPKRNLVISQPLQASKSSFGSSSLKSNQFIDQ* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1012 491 PANTHER WRKY TRANSCRIPTION FACTOR 72B 8 174 - -
Gso18g1012 491 PANTHER WRKY TRANSCRIPTION FACTOR 72B 175 483 - -
Gso18g1012 491 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 175 483 IPR044810 GO:0003700
Gso18g1012 491 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 8 174 IPR044810 GO:0003700
Gso18g1012 491 Gene3D WRKY domain 139 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso18g1012 491 ProSiteProfiles WRKY domain profile. 175 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1012 Gso-Chr18 16249935 16254888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1012 57 420 WRKY Transcription Factor Family AT5G15130 31.132 3.78e-22 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1012 - - gmx:102666229 890.567