Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1010 ATGAAGAACTTGTGGCTTTGTTTCAGTTACTTGTTTCCTGCAATCATTCTTGTTCTGCTTACTCCTTCCTCAGTTGCACAGCTATCATCAAGTGAGGGTAGAATTCTATTCCAAGTTCAGAAGCTTCTTGAGTATCCTCAAGCTCTTCAAGGATGGACAAGATGGACCAACTTGTGCTTCCTCCCTCCCTCACCTTCCCTCAAGATTGTTTGCTCCAATGGTCATGTCACAGAACTTACAATCATTGGAAACAAGACCTCTCCATCTTCACACAACCCCAAAGCAGGTGCTTGGACTTCCCTTCAGACACTGTCTGAAAGATTCTCCATTGACTCTTTCTTCACTGTCATGACAAAGCTTTCAAATTTGAAGGTGTTGTCCTTGGTGTCTTTGGGTTTGTGGGGTCCTTTACCAGCCAAGATCAACAGGTTTTGGTCCTTGGAAGTGCTTAACATTAGCTCAAATTTCATTTATGGGGGAATTCCACAATCTCTATCCTCTATGAGGAATCTAAGGAGTCTTGTTTTGGTTGATAATCTCTTCAATGGAAGTGTTCCTGACCTCCAAAGGCTAACTTCTCTAGAAGAGCTCAACTTGGGAGGCAATAATTTGGGTGCTCAATTCCCTTCAGTGGGAAAGAATCTTGTCACTATTATGTTGAGAAATAATTCACTGAGATCTCATATCCCTCCACAACTTGTGCACTTTGATAAACTTCAGGTATTTGATGTGTCTTCCAATAATTTATTTGGAAACATCCCATCCTTTTTGATCTCTTTGCCTTCCCTTCAGTACCTAAACTTGGCTTCAAACCATCTAAGTGGTAACCTCTCAGTGAATATGGCATGTAGTTCTTCACTAACATTTGTGGATATCTCACACAACCTTCTGGTTGGAAAATTGCCATCCTGCTTTGGTTCAGTGTCTTCAAAGGCCAAAGTGCTATATTCTGGGAACTGTTTGTCAACCGAAAAAAGGTTAAATGATCAACAGCATCCATTTTCTTTTTGCAAGAGAGAGGGAGCTTTGGCTGTTAAGCCTCCAGCTAAAAATCTGAAGAAGGAATCGGGTTCGGGTACAAAACTAGGCCTAATGCTTGGAATAATTGTAGGAATTGTACTAATTGGAGGACTTCTGGTACTACTTGTTGTGTGCATCTTTAGGAAGTCCAAAGCAGAAAGATCACATCCTAAACTGGACAAATCTGTTGCTAATAAATATTCTACCAGTGTATCCCCCAGACCAATTGGTACAAGACATATTCCACAGGCAATGAAGCAAGCTGCAGTTGGACTGCCACCATACCGTATCTTCACATCAGAGGAAATTGAAGATGCAACAAATAACTTTGACCCATCAAATTTAATAGAAGAGGGATCACTGGGACAGCTATATAAAGGTTGGCTCAGAGATGGTTCAGTGGTCCTTGTTAATTGTGTAAAAATAAAGCAGAAAGGTTTGCCCCACAGCATCATGCAGCAAGTAGAGGTATTACACAATTTGAGGCACAGGCATACGGTGAGTGTTCTAGGACACTGCATCATTACTGAACAGGAGCATCCCCAAACAACAAGCACAGTCTTCATTGTGTTTGAGTACATCTCAAATGTGTCATTGAGGGATCAACTTTCAGATGGGAGAAAGAGGGAAATGCTGAAATGGCCACAAAGAATGGCAATGAGCATAGGCATTGCAAGAGGAGTTCAATTCTTACACACAGGAGTTGCTCCTGGCATATATGGCAACAATTTAAAGATTGAGAACATTCTGTTGGATGATAGTCTCAATGCAAAAGTCAGTAGATACAACATTCCATTGCCATCCAAGATTGCACATATTGAACAAAATGCCACCAATCATATTGGCAGCACAAACGATGCAGAAAAGGAAGATATCTATCAGTTGGGTATTATTCTACTTGAAGTTATCACTGGCAAACAAATTACATCCTCGAGTGAAATAGAGGAGCTGAAGGAAGAGCTGGAGAATGGTTCATCAGAAGCAACATCAGTAATTAGAAGCGCAATTGATCCTTCACTGAGGGGAACTTATGCATATGAATCAATGAAAACTGCAGTTCAGATCACCATCAACTGTCTCTCCAAGGTTTCTAGTCAGCGCCCTTCAATAGAGGATGTTCTTTGGAATTTGCAGTACGCAATGCAAGTTCAAGAGTCCTGGACCAGCAGTGGAAACCTCAGCACAAAATTGTAA 2214 0.4119 MKNLWLCFSYLFPAIILVLLTPSSVAQLSSSEGRILFQVQKLLEYPQALQGWTRWTNLCFLPPSPSLKIVCSNGHVTELTIIGNKTSPSSHNPKAGAWTSLQTLSERFSIDSFFTVMTKLSNLKVLSLVSLGLWGPLPAKINRFWSLEVLNISSNFIYGGIPQSLSSMRNLRSLVLVDNLFNGSVPDLQRLTSLEELNLGGNNLGAQFPSVGKNLVTIMLRNNSLRSHIPPQLVHFDKLQVFDVSSNNLFGNIPSFLISLPSLQYLNLASNHLSGNLSVNMACSSSLTFVDISHNLLVGKLPSCFGSVSSKAKVLYSGNCLSTEKRLNDQQHPFSFCKREGALAVKPPAKNLKKESGSGTKLGLMLGIIVGIVLIGGLLVLLVVCIFRKSKAERSHPKLDKSVANKYSTSVSPRPIGTRHIPQAMKQAAVGLPPYRIFTSEEIEDATNNFDPSNLIEEGSLGQLYKGWLRDGSVVLVNCVKIKQKGLPHSIMQQVEVLHNLRHRHTVSVLGHCIITEQEHPQTTSTVFIVFEYISNVSLRDQLSDGRKREMLKWPQRMAMSIGIARGVQFLHTGVAPGIYGNNLKIENILLDDSLNAKVSRYNIPLPSKIAHIEQNATNHIGSTNDAEKEDIYQLGIILLEVITGKQITSSSEIEELKEELENGSSEATSVIRSAIDPSLRGTYAYESMKTAVQITINCLSKVSSQRPSIEDVLWNLQYAMQVQESWTSSGNLSTKL* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1010 737 SUPERFAMILY L domain-like 30 323 - -
Gso18g1010 737 Gene3D Ribonuclease Inhibitor 213 340 IPR032675 -
Gso18g1010 737 Pfam Leucine Rich Repeat 146 167 IPR001611 GO:0005515
Gso18g1010 737 Gene3D Transferase(Phosphotransferase) domain 1 534 733 - -
Gso18g1010 737 SUPERFAMILY Protein kinase-like (PK-like) 431 718 IPR011009 -
Gso18g1010 737 ProSiteProfiles Protein kinase domain profile. 450 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1010 737 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 8 730 - -
Gso18g1010 737 Pfam Protein kinase domain 456 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1010 737 PANTHER OS07G0166700 PROTEIN 8 730 IPR045272 GO:0004714|GO:0006468
Gso18g1010 737 Gene3D Ribonuclease Inhibitor 29 212 IPR032675 -
Gso18g1010 737 Gene3D Phosphorylase Kinase; domain 1 417 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1010 Gso-Chr18 16217031 16221438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1010 24 673 Miscellaneous Gene Families AT2G02780 48.060 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Gso18g1010 Pkinase 1.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1010 - - gmx:100803061 1367.06