Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1000 ATGACGACGGGGAAGTCTGATTTGGTGTCGATCCGCGTTCCCTACAAGAACCTCCACGACGATTCCTCCGCCCCCGAACTCGAACTCGTCGACGTCCACCACCGCGGCAACCACCGCAACTCGCCGCCGCCGAATCACTCTCCCTCGCCGCCGAACAGCAACAACGCTCCGCTGCTTCATCTCGTTCTCAGTTGCACCGTCGCCGCCGGCGTCCAATTCGGCTGGGCCTTGCAGCTCTCTCTCTTAACGCCCTACATTCAGACGTTGGGAATAGGACATGCGTTTTCTTCGTTTATTTGGCTCTGTGGCCCCATTACAGGTCTTGTGGTTCAACCATGCGTTGGTATTTGGAGTGATAAATGCACTTCAAGGTTTGGCAGAAGAAGACCATTCATTCTGGCAGGATCTCTTATGATATGTCTGGCTGTGATATTAATCGGATTTTCTGCAGACATTGGATATGTATTAGGTGATACACACGAGCATTGCAGAACATTTAAAGGGACCCGAACAAGGGCTGCTCTTGTATTTATTCTTGGGTTCTGGATGCTGGACCTTGCTAACAACACAGTGCAGGGGCCAGCTCGAGCACTTTTGGCTGATCTGTCTGGTCCTGATCAACGCAATGTTGCAAATGCTGTATTTTGCTCGTGGATGGCAGTTGGGAACATCCTAGGATATTCTTCAGGTGCTAGTGGAAAGTGGAACAAATGGTTTCCTTTCTTGACAACTAGAGCTTGCTGTGAAGCCTGTGGCAATCTTAAAGCGGCATTTCTTGTGGCGGTGGTGTTCCTGACATTATGCACACTTGTCACCCTATATTTTGCTGATGAGGTTCCACTTACTACTGCAAGTCAACATCATCACTTGTCAGATTCTTCTCCTTTACTGGATGAACAACAACAAAATGGTGTTGAATTTTCAAAATTAAAGCCTTCATCTGTTATGGATGAATCCAATAGTACGCGAACTGAGGATCACATTGAGAAAGATGCAGAGCTGAAACATGGGAATTTCAAAGCTAGGGAAGATCATGCTGAAAATGTAATGGATGGGCCTGGAGCAGTATTGGTAAACTTGTTGACAAGTTTAAGGCATTTGCCACCTGCTATGCATTCTGTCCTGGTTGTAATGGCTCTCACTTGGTTGTCATGGTTTCCCTTCTTTCTGTTTGATACGGATTGGATGGGCAGAGAAGTTTATCATGGTGATCCAAAAGGGGGCACTTCTGAAGTAGATCTTTATGATCAAGGAGTTAGAGAAGGTGCATTTGGTTTGCTATTGAATTCTGTTGTCCTTGGAATTAGCTCTTTCTTCATTGAACCAATGTGTAAATGGATGGGTGCAAAATTAGTATGGGCACTGAGCAATTTTATCGTCTTTGTTTGCATGGCTAGCACTGCTATCATTAGTCTTATTTCCATAAGAGATTATTCTGGAGGGATAGAACACGTAATTGGAGCAAATGAAGCAATCAAGATTGCTTCCTTGGTTGTGTTTGTTCTTCTTGGTTTTCCTCTTGCGATTACCTATAGTGTTCCCTTCGCTGTTACAGCAGAGTTGACTGCTGATTCAGGAGGTGGCCAAGGATTGGCTATAGGAGTTCTTAATCTTGCAATTGTTATTCCTCAGATGATTATATCCCTTGGTTCTGGTCCTTGGGATGCTCTCTTTGGCGGTGGCAATATTCCTGCATTTGTTTTGGCTTCTTTGTGCGCCCTTGCTGGTGGTGTCATTGCAACTCTCAAACTGCCTGATCTCTCTAGTAGTTCATTCCAGTCAACAGGATTTCATATTGGCTAG 1803 0.4542 MTTGKSDLVSIRVPYKNLHDDSSAPELELVDVHHRGNHRNSPPPNHSPSPPNSNNAPLLHLVLSCTVAAGVQFGWALQLSLLTPYIQTLGIGHAFSSFIWLCGPITGLVVQPCVGIWSDKCTSRFGRRRPFILAGSLMICLAVILIGFSADIGYVLGDTHEHCRTFKGTRTRAALVFILGFWMLDLANNTVQGPARALLADLSGPDQRNVANAVFCSWMAVGNILGYSSGASGKWNKWFPFLTTRACCEACGNLKAAFLVAVVFLTLCTLVTLYFADEVPLTTASQHHHLSDSSPLLDEQQQNGVEFSKLKPSSVMDESNSTRTEDHIEKDAELKHGNFKAREDHAENVMDGPGAVLVNLLTSLRHLPPAMHSVLVVMALTWLSWFPFFLFDTDWMGREVYHGDPKGGTSEVDLYDQGVREGAFGLLLNSVVLGISSFFIEPMCKWMGAKLVWALSNFIVFVCMASTAIISLISIRDYSGGIEHVIGANEAIKIASLVVFVLLGFPLAITYSVPFAVTAELTADSGGGQGLAIGVLNLAIVIPQMIISLGSGPWDALFGGGNIPAFVLASLCALAGGVIATLKLPDLSSSSFQSTGFHIG* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1000 600 Pfam MFS/sugar transport protein 76 223 - -
Gso18g1000 600 PANTHER SUCROSE TRANSPORT PROTEIN SUC3 35 600 - -
Gso18g1000 600 PANTHER SUGAR TRANSPORTER 35 600 - -
Gso18g1000 600 MobiDBLite consensus disorder prediction 320 334 - -
Gso18g1000 600 SUPERFAMILY MFS general substrate transporter 60 585 IPR036259 -
Gso18g1000 600 CDD MFS_SLC45_SUC 61 580 - -
Gso18g1000 600 MobiDBLite consensus disorder prediction 308 334 - -
Gso18g1000 600 Gene3D MFS general substrate transporter like domains 60 583 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1000 Gso-Chr18 15874513 15880165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1000 144 600 Sucrose Transporter Gene Family AT2G02860 71.335 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1000 K15378 - gmx:100793185 1145.18