Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0962 ATGAAGGCAGAGAAACTATCAAGGAGCAATGAAGTGTCCAATGTGATTTTCAATTTTTCTGTAAGGACTGCGACTATGCAGACACCACAGTTTTTGGGTCTGCCACAGGGAGCATGGTTTCAAGATGGTGGGTTCGAGACTGTTGGAGAAGGAGTTGTTATAGGGTTTGTTGATAACTTTTGCGTTGTTAGACATGACTTTTTGATGACGAAAAAGGAATGGGGGAACTCCATTACTCTCTTCTTCTGTTGGTACTCATCGTTCTTTGCTTCACTTTCCTCTCGCTACTCATCCTCTCAAGACACCAGTGCTGGATATTGGATCGAACATGGCTATCGCATCATAGGAGCCTTTGGTTATAGGAATTTTGGCAGCTGCAACAAAGTTTATGCAAATACTTATAGCATCAGAGTGGCAGAATCTCTAGCCTTAAGATGGTGTGTTGAAGTCATAAAAACAAGATTGAGGTTCCAGAATAGGAAGGCTAGGTGGAAGACCAAGCAGTTGGAGAAGGACTATGATCTTCTCAAAAGACAATATGATGCTATCAAGGCAGATAATGATGCACTTCAAGCTCAGAACAAAAAACTTCAAACTGAGATATTGGCACTGAAAAGCAGAGAACCAACTGAATCCATCAACCTCAACAAAGAAACTGACGGATCCAGCAGCAATAGAAGTGAGAACAGCTCAGAGATCAACTTGGATATCTCAAGAACACCAGCTATTGACAGTTCTCTATCCACTCAGCAGAGCAACAACAAAACCTTCTTTCCATCTTCTGCTAGACCAACAGGAGTGGCTCAACTTTTCCAAACCACTTCAAGGCCAGAGATTCAGTGCCAAAAGATTGATCACATGGTCAAAGAAGAGAGCTTAAGCAACATGTTTTGTGGCATTGATGATCAATCTGGCCTTTGGCCTTGGTTGGAGCAGCAACATTTCAATTGA 951 0.4217 MKAEKLSRSNEVSNVIFNFSVRTATMQTPQFLGLPQGAWFQDGGFETVGEGVVIGFVDNFCVVRHDFLMTKKEWGNSITLFFCWYSSFFASLSSRYSSSQDTSAGYWIEHGYRIIGAFGYRNFGSCNKVYANTYSIRVAESLALRWCVEVIKTRLRFQNRKARWKTKQLEKDYDLLKRQYDAIKADNDALQAQNKKLQTEILALKSREPTESINLNKETDGSSSNRSENSSEINLDISRTPAIDSSLSTQQSNNKTFFPSSARPTGVAQLFQTTSRPEIQCQKIDHMVKEESLSNMFCGIDDQSGLWPWLEQQHFN* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0962 316 Coils Coil 159 207 - -
Gso18g0962 316 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 122 316 IPR045224 GO:0003700
Gso18g0962 316 MobiDBLite consensus disorder prediction 212 235 - -
Gso18g0962 316 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 122 316 - -
Gso18g0962 316 Pfam Homeobox associated leucine zipper 167 207 IPR003106 GO:0006355|GO:0043565
Gso18g0962 316 MobiDBLite consensus disorder prediction 215 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0962 Gso-Chr18 14687874 14692279 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0962 121 316 Homeobox Transcription Factor Family AT1G69780 49.519 1.97e-51 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0962 K09338 - gmx:100813236 324.709