Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0951 ATGGAACGAAGTGGCGGAATGGTAACGGGGTCGCATGAAAGGAACGAACTTGTTAGAGTTAGACACGGTTCTGACAGTGGGATTTGTCAAATATGTGGTGACACCATTGGATTAACGGCTACTGGTGACCTCTTTGTTGCTTGTCATGAGTGTGGCTTCCCACTTTGTCATTCTTGTTACGAGTATGAGCTGAAAAATGTGAGCCAATCTTGTCCCCAGTGCAAGACTACATTCACAAGTCGCCAAGAGGGTGCTGAAGTGGAGGGAGATGATGATGACGAAGACGATGCTGATGATCTAGATAATGGGATCAACTATGGCCAAGGAAACAATTCCAAGTCGGGGATGCTGTGGGAAGAAGATGCTGACCTCTCTTCATCTTCTGGACATGATTCTCATATACCAAACCCCCATCTAGTAAACGGGCAACCGATGTCTGGTGAGTTTCCATGTGCTACTTCTGATGCTCAATCTATGCAAACTACATCAGATCCTATGGGTCAATCCGAAAAGGTTCACTCACTTCCATATGCTGATCCAAAGCAACCAGGTCCTGAGAGTGATGAAGAGATAAGAAGAGTGCCGGAGATTGGAGGTGAAAGCGCTGGAACTTCAGCCTCTCGGCCAGATGCCGGTTCAAATGCTGGTACAGAACGTGCTCAGGGGACAGGGGACAGCCAGAAGAAGAGAGGGAGAAGCCCAGCTGATAAAGAAAGCAAGCGGCTAAAGAGGCTACTGAGGAATAGAGTTTCGGCTCAGCAAGCAAGGGAGAGGAAGAAGGCATATTTGATTGATTTGGAAACAAGAGTCAAAGACTTAGAGAAGAAGAACTCAGAGCTCAAAGAAAGACTTTCCACTTTGCAGAATGAAAACCAAATGCTTAGACAAATATTGAAGAACACAACAGCAAGCAGGAGAGGGAGCAATAGTGGTACCAATAATGCTGAGTAA 951 0.4616 MERSGGMVTGSHERNELVRVRHGSDSGICQICGDTIGLTATGDLFVACHECGFPLCHSCYEYELKNVSQSCPQCKTTFTSRQEGAEVEGDDDDEDDADDLDNGINYGQGNNSKSGMLWEEDADLSSSSGHDSHIPNPHLVNGQPMSGEFPCATSDAQSMQTTSDPMGQSEKVHSLPYADPKQPGPESDEEIRRVPEIGGESAGTSASRPDAGSNAGTERAQGTGDSQKKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLIDLETRVKDLEKKNSELKERLSTLQNENQMLRQILKNTTASRRGSNSGTNNAE* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0951 316 MobiDBLite consensus disorder prediction 86 101 - -
Gso18g0951 316 MobiDBLite consensus disorder prediction 79 259 - -
Gso18g0951 316 Pfam Zinc-binding RING-finger 25 95 IPR027934 -
Gso18g0951 316 Pfam bZIP transcription factor 237 298 IPR004827 GO:0003700|GO:0006355
Gso18g0951 316 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 152 308 IPR044280 GO:0000981|GO:0045944
Gso18g0951 316 MobiDBLite consensus disorder prediction 206 222 - -
Gso18g0951 316 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 11 103 IPR013083 -
Gso18g0951 316 SMART brlzneu 236 300 IPR004827 GO:0003700|GO:0006355
Gso18g0951 316 MobiDBLite consensus disorder prediction 223 259 - -
Gso18g0951 316 CDD bZIP_HY5-like 241 292 - -
Gso18g0951 316 Gene3D Single helix bin 259 300 - -
Gso18g0951 316 ProSiteProfiles Zinc finger RING-type profile. 29 75 IPR001841 -
Gso18g0951 316 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 152 308 - -
Gso18g0951 316 CDD mRING-HC-C4C4_CesA_plant 28 76 - -
Gso18g0951 316 Coils Coil 235 304 - -
Gso18g0951 316 SUPERFAMILY RING/U-box 20 99 - -
Gso18g0951 316 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 238 301 IPR004827 GO:0003700|GO:0006355
Gso18g0951 316 MobiDBLite consensus disorder prediction 147 169 - -
Gso18g0951 316 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 243 258 IPR004827 GO:0003700|GO:0006355
Gso18g0951 316 SUPERFAMILY Leucine zipper domain 240 298 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0951 Gso-Chr18 14399472 14403056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0951 176 297 bZIP Transcription Factor Family AT5G11260 71.545 5.27e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso18g0951 zf-UDP 3.9e-32 CL0229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0951 K10999 K16241 gmx:548004 605.905