Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0948 ATGGCTACCCTTTCTTCTTTCAGTTTTGTACCCTTTTGCATGTTCTTCTTCCTTGTGTGCCTCACTAGTCCTGCTTATGTTTCTTCACTTCCTCTTTCCCTGAGAAGGCAAGCTTCAATCCTTGTTTCTATGAAGCAAGATTTTGGAGTTGCAAACTCTTCTCTGAGGAGCTGGGACATGTCAAATTACATGTCCCTTTGCAGCACTTGGTATGGCATTCAGTGTGACCAGGACAACATCTCTGTGGTGTCACTTGACATATCTAATTTGAATGCCTCAGGGTCACTTTCACCTTCCATCACAGGACTCTTGAGCCTTGTGAGTGTCTCACTCCAGGGAAATGGCTTCTCTGGGGAGTTTCCAAGGGACATTCACAAGCTACCAAAGCTGAGGTTCCTCAACATGTCTATCAACATGTTCAGTGGGAACTTGAGTTGGAAATTCTCCCAGCTGAAGGAGCTTGAAGTCCTGGATGCCTATGACAATGCTTTCAATTGCTCACTTCCTCAGGGTGTCATTGGTCTCCCAAAGATCAAGCACTTGAACTTTGGAGGGAACTACTTCTCTGGAGAAATCCCTCCAAGCTATGGAAAAATGTGGCAGCTCAACTTTCTGTCTCTTGCAGGGAATGATTTGAGAGGCTTCATACCAAGTGAGCTTGGGAATCTCACTAACCTGACTCATCTTTACTTGGGATACTACAATCAGTTTGATGGTGGAATCCCTCCTCAGTTTGGTAAGCTGACCAATTTGGTTCATCTAGACATTGCAAACTGTGGCTTGACAGGTCCAATTCCTATTGAGTTGGGAAACCTCTACAAGTTAGACACTCTTTTCTTGCAAACCAATCAGCTAAGTGGTTCAATCCCTCCCCAGTTAGGAAACTTGACTATGTTAAAAGCCCTTGATCTATCATTCAACATGCTCACAGGAGGCATCCCTTATGAGTTCTCAGCCCTTCATGAGCTTACTCTCTTGAACTTGTTTATAAACAAGTTGCATGGAGAAATTCCTCACTTCATTGCTGAGCTACCTAAATTGGAGACTCTGAAGCTGTGGCAGAACAACTTCACTGGAGTGATTCCTTCAAATCTTGGCCAGAATGGAAGGTTGATTGAGCTTGATTTGTCAACAAATAAGCTCACTGGTTTGGTGCCAAAATCTCTATGCCTCGGAAAGAGGCTGAAAATCTTGATCCTGCTGAAGAACTTTCTGTTTGGATCTTTGCCTGATGATCTTGGTCAATGCCACACACTCCAAAGAGTCCGTTTGGGCCAGAACTATTTAACTGGGCCACTGCCACATGAGTTTCTTTATTTGCCTGAGCTATTACTTGTGGAGCTACAGAACAATTATCTTAGTGGTGGCTTTCCACAATCAACAAGCAACACATCCTCCAAACTAGCACAGTTGAACCTATCAAACAACCGGTTTTCGGGGACTCTTCCAGCCTCAATTTCAAATTTTCCAAACTTGCAAATCCTTCTGCTCAGTGGAAACAGATTCACAGGTGAAATCCCACCAGATATAGGGAGATTGAAAAGTATCCTCAAGTTGGATATTAGTGCTAACAGCTTTTCAGGTACTATTCCCCCTGGGATAGGTAGCTGTGTCTTACTCACCTATTTAGATTTGAGCCAAAACCAACTATCAGGCCCTATTCCGGTCCAAGTTGCTCAAATTCACATATTAAATTATCTCAATGTCTCATGGAACCACCTAAACCAAAGCCTGCCCAAGGAACTTAGGGCCATGAAGGGTTTAACTTCAGCAGATTTCTCTTACAATAACTTCTCAGGCTCAATACCTGAGGGGGGCCAATTCTCACTCTTTAATTCCACATCCTTTGTTGGTAACCCTCAGCTATGTGGATATGACTCCAAGCCATGCAATCTTTCTTCAACAGCTGTGTTGGAATCTCAACAAAAAAGCAGTGCAAAACCTGGGGTCCCTGGGAAGTTCAAGTTCCTCTTTGCTTTGGCATTGTTGGGGTGTTCATTGATTTTTGCAACATTGGCAATCATCAAGAGTAGAAAGACAAGGAGGCACTCCAATTCATGGAAGTTAACAGCATTCCAGAAGCTTGAATATGGGAGTGAGGACATCACAGGGTGCATAAAGGAAAGCAATGTCATAGGAAGAGGAGGATCAGGTGTTGTATACAGAGGAACCATGCCTAAGGGAGAGGAAGTGGCAGTGAAGAAGCTCTTAGGAATCAACAAAGGCTCTTCCCATGACAATGGCCTCTCTGCAGAAATAAAAACATTGGGGAGAATCAGGCACAGGTACATTGTGAGGCTACTCGCATTTTGTTCAAACAGAGAGACCAATTTGCTTGTTTATGATTATATGCCAAATGGAAGCTTGGGAGAAGTCTTGCATGGGAAGAGGGGTGAGTTTCTCAAGTGGGACACTAGGCTCAAAATAGCTATAGAAGCTGCAAAAGGACTTTGCTATTTGCACCATGATTGTTCCCCTTTGATCATCCATAGGGATGTAAAGTCAAACAACATATTGTTGAACTCTGACTTTGAGGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTCATGCAAGATAATGGGGGATCAGAGTGCATGTCTTCCATTGCTGGCTCTTATGGCTATATTGCTCCAGAATATGCATACACATTGAAAGTGGATGAGAAAAGTGATGTTTATAGCTTTGGAGTGGTGCTGCTAGAACTGATAACGGGACGAAGGCCAGTGGGGGATTTTGGTGAAGAAGGATTAGACATTGTTCAATGGACCAAGATGCAAACCAATTGGAACAAAGAGATGGTGATGAAGATCCTTGATGAGAGGCTAGATGACATTCCTTTAGCTGAAGCAATGCAGGTGTTTTTTGTGGCAATGTTGTGTGTTCATGAACACAGTGTGGAGCGACCAACCATGAGGGAAGTGGTTGAAATGCTTGCTCAAGCAAAGCAACCAAACACATTTTAA 2964 0.4345 MATLSSFSFVPFCMFFFLVCLTSPAYVSSLPLSLRRQASILVSMKQDFGVANSSLRSWDMSNYMSLCSTWYGIQCDQDNISVVSLDISNLNASGSLSPSITGLLSLVSVSLQGNGFSGEFPRDIHKLPKLRFLNMSINMFSGNLSWKFSQLKELEVLDAYDNAFNCSLPQGVIGLPKIKHLNFGGNYFSGEIPPSYGKMWQLNFLSLAGNDLRGFIPSELGNLTNLTHLYLGYYNQFDGGIPPQFGKLTNLVHLDIANCGLTGPIPIELGNLYKLDTLFLQTNQLSGSIPPQLGNLTMLKALDLSFNMLTGGIPYEFSALHELTLLNLFINKLHGEIPHFIAELPKLETLKLWQNNFTGVIPSNLGQNGRLIELDLSTNKLTGLVPKSLCLGKRLKILILLKNFLFGSLPDDLGQCHTLQRVRLGQNYLTGPLPHEFLYLPELLLVELQNNYLSGGFPQSTSNTSSKLAQLNLSNNRFSGTLPASISNFPNLQILLLSGNRFTGEIPPDIGRLKSILKLDISANSFSGTIPPGIGSCVLLTYLDLSQNQLSGPIPVQVAQIHILNYLNVSWNHLNQSLPKELRAMKGLTSADFSYNNFSGSIPEGGQFSLFNSTSFVGNPQLCGYDSKPCNLSSTAVLESQQKSSAKPGVPGKFKFLFALALLGCSLIFATLAIIKSRKTRRHSNSWKLTAFQKLEYGSEDITGCIKESNVIGRGGSGVVYRGTMPKGEEVAVKKLLGINKGSSHDNGLSAEIKTLGRIRHRYIVRLLAFCSNRETNLLVYDYMPNGSLGEVLHGKRGEFLKWDTRLKIAIEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKFMQDNGGSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNWNKEMVMKILDERLDDIPLAEAMQVFFVAMLCVHEHSVERPTMREVVEMLAQAKQPNTF* 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0948 987 PANTHER UNNAMED PRODUCT 12 985 - -
Gso18g0948 987 Gene3D Ribonuclease Inhibitor 292 370 IPR032675 -
Gso18g0948 987 Gene3D Ribonuclease Inhibitor 371 634 IPR032675 -
Gso18g0948 987 SMART serkin_6 706 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0948 987 Gene3D Ribonuclease Inhibitor 34 192 IPR032675 -
Gso18g0948 987 SUPERFAMILY L domain-like 54 386 - -
Gso18g0948 987 SUPERFAMILY L domain-like 312 638 - -
Gso18g0948 987 SMART LRR_typ_2 489 513 IPR003591 -
Gso18g0948 987 SMART LRR_typ_2 344 368 IPR003591 -
Gso18g0948 987 SMART LRR_typ_2 369 391 IPR003591 -
Gso18g0948 987 SMART LRR_typ_2 272 296 IPR003591 -
Gso18g0948 987 Gene3D Phosphorylase Kinase; domain 1 673 783 - -
Gso18g0948 987 ProSitePatterns Serine/Threonine protein kinases active-site signature. 828 840 IPR008271 GO:0004672|GO:0006468
Gso18g0948 987 Gene3D Transferase(Phosphotransferase) domain 1 784 986 - -
Gso18g0948 987 ProSiteProfiles Protein kinase domain profile. 706 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0948 987 SUPERFAMILY Protein kinase-like (PK-like) 699 978 IPR011009 -
Gso18g0948 987 ProSitePatterns Protein kinases ATP-binding region signature. 712 735 IPR017441 GO:0005524
Gso18g0948 987 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 12 985 - -
Gso18g0948 987 Gene3D Ribonuclease Inhibitor 193 291 IPR032675 -
Gso18g0948 987 Pfam Protein kinase domain 708 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0948 Gso-Chr18 14304534 14309409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0948 23 980 Receptor kinase-like Gene Family AT5G65700 57.069 0.0 1079
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso18g0948 Pkinase 3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0948 - - gmx:100803075 1913.66