Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0931 ATGAAGAATTCTAAGAAAACTGGAGTACGGAAGTACCACAAATCGGAAAATCCACGCTTGCGGTGGACACCTGAACTCCATGAATACTTTGTTGAAGTTGTGGAAGGTCTTGGTGGAAAAAACAAGGCAACACCAAAGAGCATTCTGCAGATGATGCATGTGAAAGGACTGAGGATCTCTCACATTAAAAGCCATCTTCAGATGTACAGGAGCATGAAGGGACATACGATTCTCGCATCAATGCAACAGGAGATGGAAGAAAATGTGCATGTTAACGACCATCACTCAATCTGCTCCAACTGTTCATCCCAAAGATCACAAGAAATTCACCCGTTTGAAAGTAAAGGACTTTCACAGACCAGTGAAACTGATAATTACGATCTAAATCAGGAACCCGAGTCAAGTGCTTGTTTATTTAGTGATACGTCAAATGAAGAAAATAGTAGGACAATGAAATTTCTTGATCTCTCATTCTCTTTCGGCTCTCCACTAACTCCAACGATTGACGGTGATCAAGAGAGAATGCGTTTCTCTTCGCCAAATACAGCAGATAATATTCATGTCATCGATTCTAATTCTGTAGAATCTCATGGGAGCAATTATATAAATTTAGACCTAACAATATGA 627 0.3971 MKNSKKTGVRKYHKSENPRLRWTPELHEYFVEVVEGLGGKNKATPKSILQMMHVKGLRISHIKSHLQMYRSMKGHTILASMQQEMEENVHVNDHHSICSNCSSQRSQEIHPFESKGLSQTSETDNYDLNQEPESSACLFSDTSNEENSRTMKFLDLSFSFGSPLTPTIDGDQERMRFSSPNTADNIHVIDSNSVESHGSNYINLDLTI* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0931 208 Pfam Myb-like DNA-binding domain 20 70 IPR001005 -
Gso18g0931 208 SUPERFAMILY Homeodomain-like 16 72 IPR009057 -
Gso18g0931 208 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 2 153 IPR044848 GO:0003700
Gso18g0931 208 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 17 72 IPR006447 GO:0003677
Gso18g0931 208 Gene3D - 17 74 - -
Gso18g0931 208 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 2 153 - -
Gso18g0931 208 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 74 IPR017930 -
Gso18g0931 208 MobiDBLite consensus disorder prediction 109 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0931 Gso-Chr18 13605413 13609941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0931 8 73 G2-like Transcription Factor Family AT1G14600 65.152 2.30e-24 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso18g0931 Myb_DNA-binding 2.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0931 - - gmx:100791958 423.705