Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0927 ATGATGCAAAGCTCCAGGAAGCACATAAGATCCAAGCCATTTACAAAAATGGTAACCATTAAAGCATCTTACACAGTCCTTCCAAATGAACCAACTCCGGAGGGCCTTTTATGGCTATCTGATATTGATCAAGTGGCACGTCTACGCCACACACCCACCATCTACATTTTCCATGCAAAACACAACCATGATACATTAATTGAGAGGATGAGAAACTCTCTTAGCAAGATTTTGGTTCACTACTATCCAATAGCCGGTCGATTGAGAAGGATAGAAGGTAGTGGTCGATTGGAATTGGATTGCAATGCAAAAGGGGTGGTGTTGCTTGAAGCTGAATCCACAAAAACATTGGATGATTATGGAGACTTTTTACGTGAGTCCATCAAGGACTTGGTTCCAACGGTTGATTACACAAGCCCTATAGAGGAACTTCCCTCGCTACTAGTTCAAGTAACAACATTCCATGGTGGTAAATCCTTTGCCATTGGAGTTGCCTTATGCCATATCTTGTGTGATGGGGTTGGTGCCATTCAGTTTATCAACTCTTGGGCAAAGTTAGCTCGAGGAGACACATTGGAGCCACATGAGATGCCATTTCTGGATCGAACAGTGCTCAAGTTCCCACACCCTCTGTCGCCGCCGCGCTTTGATCACCTGGAGTTCAAGCCTTTGCCACTTATATTGGGAAGATCTGACAACACAGTAGAGAAAAACAAGAAGGTTGATGCCACCTTGCTGAAGCTAACACCAGAACAAGTGGGGAAGCTGAAGAAGAAGGCCAATGATGACTCAACAAAAGAAGGGTCAAGACCTTATAGCAGATTTGAAGCTATTGCTGCACATATATGGAGATGTGCCTCTAAGGCTCGTGAACTAGATAAGAATCAACCAACTCTAGTTCGGTTCAATGCCGATATTCGCAATAGACTAATTCCACCTCTCCCTAAGAATTATTTTGGGAATGCTTTGTCCTTAACAACAGCATCATGTCACGTTGGAGATGTCATATCAAATTCTTTGAGTTATGCTGCTCAGAAGATAAGGGAAGCAATTGAAGTGGTTACATATGAGTATATATGGTCACAGATAGATGTGATTAGAGGTCAGGAGCAACTGGATAATGCAAGGGCTTTGTTCTTTGGACAAAATGAAGGAAAGGATGCCTTGTTTTATGGGAACCCTAACCTTCTTATTACAAGTTGGATGAGCATGCCAATGCACGAAGCAGATTTTGGCTGGGGAAAGCCTGTGTATTTAGGTCTAGGAAGTGTATCTACACAAGATAGGGCACTGATTATTCAAAGCCCTGATGGTGACGGCTCTATTATTCTGTCCATACACTTTCAGATGGAACATATGCAGCTTTTCAAGAAATATTTTTATGAAGATATGTGA 1395 0.4237 MMQSSRKHIRSKPFTKMVTIKASYTVLPNEPTPEGLLWLSDIDQVARLRHTPTIYIFHAKHNHDTLIERMRNSLSKILVHYYPIAGRLRRIEGSGRLELDCNAKGVVLLEAESTKTLDDYGDFLRESIKDLVPTVDYTSPIEELPSLLVQVTTFHGGKSFAIGVALCHILCDGVGAIQFINSWAKLARGDTLEPHEMPFLDRTVLKFPHPLSPPRFDHLEFKPLPLILGRSDNTVEKNKKVDATLLKLTPEQVGKLKKKANDDSTKEGSRPYSRFEAIAAHIWRCASKARELDKNQPTLVRFNADIRNRLIPPLPKNYFGNALSLTTASCHVGDVISNSLSYAAQKIREAIEVVTYEYIWSQIDVIRGQEQLDNARALFFGQNEGKDALFYGNPNLLITSWMSMPMHEADFGWGKPVYLGLGSVSTQDRALIIQSPDGDGSIILSIHFQMEHMQLFKKYFYEDM* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0927 464 Gene3D - 15 223 IPR023213 -
Gso18g0927 464 Gene3D - 230 463 IPR023213 -
Gso18g0927 464 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 20 464 - -
Gso18g0927 464 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 20 464 - -
Gso18g0927 464 Pfam Transferase family 17 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0927 Gso-Chr18 13448279 13450196 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0927 18 462 Monolignol Biosynthesis Gene Families AT5G48930 36.018 1.28e-93 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0927 K13065 - gmx:100778626 939.873