Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0924 ATGATGCCTAATTTTTTTCAAATGGCAAGATTAACTGCATCATCATCATTCGCACGCCAAAGCACTACCCATATTCAATTGGGTTCTCTTCTGCAACACAAACACAATGCTTTCCCTTTTTCCTTCACTTCACTCACTTCAGGCACCTCTTCTGATTCTGAATCAGATGGAAACCACCACAAAGGTGACACCTTTACTGTGTCTTACCTCATTAACTCATGTGGGGTGTCCCCAAAACTGGCCAAGGAGCTCTCCAACAGGGTCAATTTGAAAAACGCACATGGCCCAAATGCTGTTCTTGATCTTCTCAACAACTATGGTTTGTCCAAAATCCAGGTTGCAAAACTCGTTGAGAAATATCCCAAAGTTCTTATTATAAAGGCAGAGAAAACCCTTTTGCCTAAACTGAAGTTCTTCCGTTCTATTGGGGTTTCCAACACTGACATGCCAAAGATCCTACTTCGTAACTATGTTATCTTGAAGAGTAGCTTGGAAAATTACCTCATCCCCCGCTATGAGATCCTGCGTGATATAGTCGGCGATGATCAGAAAGTTGTTAGATCTTTGAAAATTACCGCTTTTTGTCTTACATATGGTGACATGATGAATAACTTTGTTCCAAACATTAAGGTTTTGAGGCAATCTAGTGTGCCTCAAACTTCCATCTCTCTCTTGATGGGCCATTTTCCTGGTGCAGCATATAGGAAGCATTCCAAATTTGTGGAAGCTGTCAAGACTGCTAAGGAAATTGGGTGTGATCCTTTGAAAGTATCTTTTGTGCAGGCTGTCCATTTGCTTTTATCTACTAGTAAAGCAATGCTGGATTCAAAATTTGAGGTTTATGAGAGGTGGGGCTGGAGCTACAAAATAGCTCTTCGAGCATTTGGCAAGTTTCCCTTTTTTATGGTGTTGTCAAAGGAGACATATACAAAAAAAATGAGTTTCCTAGTGAAGGATATGGGTTTGCCATCAGAAGATATTGCTGATTATCCTCTTGTTCTATCTTACAGCTTGGAGAAGAGGATTATCCCTAGATTCTCAGTAATTAAAATCTTGCAATCAAATAATCTGCTTAGGAATGATTTTCACTTCGGTTCCTTTATTTGCATAAATGAGAAAAACTTTCTGAAGAAATTTGTCATCAAATTTCGGGATGATTTGCCTCATTTATCTGATGTCTACAAAGGGTTGATCAATAATCAGAATGAAATATAG 1215 0.3893 MMPNFFQMARLTASSSFARQSTTHIQLGSLLQHKHNAFPFSFTSLTSGTSSDSESDGNHHKGDTFTVSYLINSCGVSPKLAKELSNRVNLKNAHGPNAVLDLLNNYGLSKIQVAKLVEKYPKVLIIKAEKTLLPKLKFFRSIGVSNTDMPKILLRNYVILKSSLENYLIPRYEILRDIVGDDQKVVRSLKITAFCLTYGDMMNNFVPNIKVLRQSSVPQTSISLLMGHFPGAAYRKHSKFVEAVKTAKEIGCDPLKVSFVQAVHLLLSTSKAMLDSKFEVYERWGWSYKIALRAFGKFPFFMVLSKETYTKKMSFLVKDMGLPSEDIADYPLVLSYSLEKRIIPRFSVIKILQSNNLLRNDFHFGSFICINEKNFLKKFVIKFRDDLPHLSDVYKGLINNQNEI* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0924 404 PANTHER CGI-12 PROTEIN-RELATED 38 397 IPR003690 GO:0003690|GO:0006355
Gso18g0924 404 SMART mt_12 257 287 IPR003690 GO:0003690|GO:0006355
Gso18g0924 404 SMART mt_12 114 145 IPR003690 GO:0003690|GO:0006355
Gso18g0924 404 SMART mt_12 150 181 IPR003690 GO:0003690|GO:0006355
Gso18g0924 404 SMART mt_12 292 323 IPR003690 GO:0003690|GO:0006355
Gso18g0924 404 SMART mt_12 324 358 IPR003690 GO:0003690|GO:0006355
Gso18g0924 404 Pfam mTERF 188 375 IPR003690 GO:0003690|GO:0006355
Gso18g0924 404 Pfam mTERF 100 302 IPR003690 GO:0003690|GO:0006355
Gso18g0924 404 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 38 397 - -
Gso18g0924 404 Gene3D Transcription termination factor 3, mitochondrial 200 385 IPR038538 -
Gso18g0924 404 Gene3D Transcription termination factor 3, mitochondrial 70 199 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0924 Gso-Chr18 13417855 13419382 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso18g0924 mTERF 2.8e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0924 K15032 - gmx:100788793 775.393