Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0915 ATGCCAAATCTGACAACGTTCACTGAAATCTATGGAAACTACCACAAAGGTGACACTTTTACTGTGTCTTATCTCATCAACTCATGTGGGGTGTCCCCAAGAAAAGCCAAGGAACTCTCCAATAGGATCAATTTGAAAACCCCAGATGGCCCAAATGCTGTTATTGATCTTCTCAACAACTATGGCTTCACCAAAACCCATCTTGCAAAACTTGTGGAGAAACACCCTTTGGTGCTTGTTGCGGATGCAGAGAATACCCTTTTGCCTAAACTCAAGTTCTTCCGTTCTATTGGGCTTTCCAACACTGACATGCGTAAGATTTTAATTGCTAACCATACCTTGAACAGGAGCTTGAAAAAATTCTTCATCCCACGTTATGAGATCCTCAGACGTGTACTTGGTGATGATCAAGAAGTTGTTAGAGCTATAACAAATTCCCGATTTGGTTTTACATATGGTGACACAATGAACTTGGTTCCAAACATTGAGGTTTTGAGGCAGTCTGGTGTGCCGCAAGCTTCTATCACTTTCCTGATGATCAATTCTGCGACTGTAGCCTACTGGAAGCATTCCAGATTTGTGGAAGCTGTCAACACTGCTAAGGAAATTGGGCTTAATCCCTTGAGAACAAATTTTATTGTGGCCGTTGAAATGCTTCTAATTAGGAGCAAAGCCGTATGGGAATCAAGGTTTGAGGTTTATGAGAGGTGGGGTTGGAATCGCGAAATGGCTCTTCAAGTATTTCGAAAGTTTCCCTGTGTTATGAAGTTGTCAGAGGAGACGTTTGCCAAAAAAATGAGTTTCCTAGTGAAAGATATGGGTTGGTTATCAGAAGATATTGCTGAATATCCTCAGGTGATAGCGTACAACTTGGAGAAGAGGATTATCCCTAGATTCTCGGTAATCAAAATCTTGAAATCAAAAGGTCTGATTGAGAACAAATTGCACTTAAGTGCCATTATTTGCATAACTGAGAAAAAATTTCTAGAGAATTTTGTGGTCAGTTTTCAGAAAGATTTGCCTCTCTTACCAGATGTCTATGGTGGAAAGGTCAAGCCTTCAAATGTAATGTAA 1074 0.4032 MPNLTTFTEIYGNYHKGDTFTVSYLINSCGVSPRKAKELSNRINLKTPDGPNAVIDLLNNYGFTKTHLAKLVEKHPLVLVADAENTLLPKLKFFRSIGLSNTDMRKILIANHTLNRSLKKFFIPRYEILRRVLGDDQEVVRAITNSRFGFTYGDTMNLVPNIEVLRQSGVPQASITFLMINSATVAYWKHSRFVEAVNTAKEIGLNPLRTNFIVAVEMLLIRSKAVWESRFEVYERWGWNREMALQVFRKFPCVMKLSEETFAKKMSFLVKDMGWLSEDIAEYPQVIAYNLEKRIIPRFSVIKILKSKGLIENKLHLSAIICITEKKFLENFVVSFQKDLPLLPDVYGGKVKPSNVM* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0915 357 Gene3D Transcription termination factor 3, mitochondrial 109 340 IPR038538 -
Gso18g0915 357 Pfam mTERF 55 256 IPR003690 GO:0003690|GO:0006355
Gso18g0915 357 Pfam mTERF 222 329 IPR003690 GO:0003690|GO:0006355
Gso18g0915 357 SMART mt_12 140 171 IPR003690 GO:0003690|GO:0006355
Gso18g0915 357 SMART mt_12 277 311 IPR003690 GO:0003690|GO:0006355
Gso18g0915 357 SMART mt_12 105 136 IPR003690 GO:0003690|GO:0006355
Gso18g0915 357 SMART mt_12 69 100 IPR003690 GO:0003690|GO:0006355
Gso18g0915 357 SMART mt_12 245 276 IPR003690 GO:0003690|GO:0006355
Gso18g0915 357 PANTHER CGI-12 PROTEIN-RELATED 11 351 IPR003690 GO:0003690|GO:0006355
Gso18g0915 357 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 11 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0915 Gso-Chr18 13328936 13330512 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso18g0915 mTERF 4.9e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0915 K15032 - gmx:100786128 712.22