Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0905 ATGAATGTTAAGGTGCATAGCTCTGATGATACCAAGAAGGATGAAGAGGTTGTGCTTCCTGGCTTTAGATTCCACCCCACGGATGAAGAGCTTGTTGGGTTTTATCTGCAGAGAAAGGTGGACAAAAAGCCTCTAAAAATTGAACTCATCAAACAGGTTGATATCTACAAATATGATCCATGGGATCTTCCAAAGGTGAATTCTTTTGGGGACAAAGAGTGGTATTTTTTCTGCATAAGAGGGAGGAAGTACAGAAACAGCGTGAGGCCAAACAGGGTAACTAGGTCAGGGTTCTGGAAGGCCACAGGGATTGACAAGTCCATATATTGCGTGAAAGAACCCCATGAATGCATTGGCCTGAAGAAGTCATTGGTCTATTACCGTGGAAGTGCTGGCAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGCCTTCCACCCAATGCAAAATCCAGCCCCAATGATGTTCAAGAAGCAGAGGTGTGGACACTCTGCAGGATATTCAAACGCATCCCATCTTTCAAGAAGTACGCTCCAAACTTGAAAGACTCAACACCAGCCACCAAACCAAACCCTGTGAATTCCAACGCATCCATCTTAGATTCTGACAATTGCTGCAAGCCATATTTGATTTGCAGAGACCCTATGATGATGCAACAAATAGAAAGAAAACCAGTTATTGGACAAGTTGATGAAAAGAAACACTTGTTTTTGGGCCAATTTGGCCCACTATCCCATCTTCAGGCCCCATCAACCACCCCTTACCCAAATTTTTGGAACCAGAATAATGTTGAGGACCACGCATTTGCCAATGAGAATTGGGATGACCTAAGATCTGTGGTTCAGTTTGCAATCGATCCATCCACGGTGTTTGATTGTACCGAAACATATATTCCACCCTACTTTTCTTAG 915 0.435 MNVKVHSSDDTKKDEEVVLPGFRFHPTDEELVGFYLQRKVDKKPLKIELIKQVDIYKYDPWDLPKVNSFGDKEWYFFCIRGRKYRNSVRPNRVTRSGFWKATGIDKSIYCVKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNAKSSPNDVQEAEVWTLCRIFKRIPSFKKYAPNLKDSTPATKPNPVNSNASILDSDNCCKPYLICRDPMMMQQIERKPVIGQVDEKKHLFLGQFGPLSHLQAPSTTPYPNFWNQNNVEDHAFANENWDDLRSVVQFAIDPSTVFDCTETYIPPYFS* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0905 304 Pfam No apical meristem (NAM) protein 20 146 IPR003441 GO:0003677|GO:0006355
Gso18g0905 304 SUPERFAMILY NAC domain 14 170 IPR036093 GO:0003677|GO:0006355
Gso18g0905 304 Gene3D NAC domain 27 174 IPR036093 GO:0003677|GO:0006355
Gso18g0905 304 ProSiteProfiles NAC domain profile. 18 171 IPR003441 GO:0003677|GO:0006355
Gso18g0905 304 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 296 - -
Gso18g0905 304 PANTHER - 3 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0905 Gso-Chr18 13067477 13073070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0905 8 171 NAC Transcription Factor Family AT5G39820 57.377 2.73e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso18g0905 NAM 1.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0905 - - gmx:100819795 647.891