Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0874 ATGGTGTGGCTTGCAAATTGGGTCATGAACCAAGTGCTTGTTAAATCATGTTATGGATTTGCAAGAAAACTTAAAAGCCATGGGTTTCATTGGGGTGATCTTTCATCCAAACCATTGCATCAACCTTCCCCTTTCCCTAATATTGCCAAGTGTGATTTGGAGTGTAGAGGGTCACAAACCCTAGCTTGTGACTTTCACAAAGTCCTCTTAAGGACTCATTCCTTCTTTCCCTATTTCATGCTTGTTGCCTTTGAAGGTGGAAGCATTTTTAGGGCATTCTTCTTGCTTTGTTCATGCCCTATGCTGTGGATCTTAAACTATGAAATGAAGCTTAGGGTCATGATCTTCATCTCCTTTTGTGGCCTCAGAATGAAGGACATGGAAAACACTTCAAGGGCAGTTTTGCCGAAGTTCTACTTGGAGAACCTCAACCTTGAGGCCTATGAGGTAGTGGCTTCAGTAGGGTCCAGAGTTTTCTTCACCACTATGCCTAGAGTGATGGTTGAAGGGTTTCTCAAGGAGTATTTGAATGCTGATGCTGTTATAGCCACAGAATTGCACACTTCTGGTTGTTACTTCACTGGTTTGCTCTCTAAGTCTGGTTTGCTTGTGAAGCATAGTGCCCTCATGGACTATTTTGGAGATACAAAGCCTGACCTTGGGATTGGCAACACAAGTCTTCATGATCAGCTTTTTATTTCTCTTTGCAAGGAGGCTTATGTGGTGATCAATGAAGAGGGCAAAGTGATGCCAAGAAACAAATATCCAAAGCCCTTAATATTTCATGATGGAAGGCTAGCATTTTTGCCTACTCCTTCCGCAACCCTTCTTATGTTCATGTGGCTCCCCCTTGGATTTCTGATGGCCATTTACAGAATTTTTCTGGGGGTTTTCCTTTGTTGCAAATTTACATTGGCGTTAGGAATATGGAGTGGACTAATTCTGAATTTCAATGACAAGAACCAACAAAGATCAGAGTCAAACAAAGGGGTGCTCTATGTGTGTAGCCACAGGACTCTCATGGATCCAATTTTTCTTAGCATAACGCTGGGGAGGCGTTTGACTGCTGTCACATACAGCTTAAGCAAGGTGTCTGAATTGATAGCCCCTATTAGGACAATGAGACTCACAAGGGACAGAGAACAAGACGGGGAAACTATGAAAAGGTTGCTTTGTGAAGGGGATTTGGTGGTGTTCCCTGAAGGAACAACTTGTAGGGAGCCATATTTACTAAGGTTCAGTTCTTTGTTTGCTGAACTTGCTGATGAGATTGTGCCTGTGGCTATGAATGCTCATGTGACCATGTTCTATGGGACCACAGCCAGTGGACTAAAGGTCTTGGACCCTATTTTCTTCTTCATGAACCCTTGGCCAAGATATGACATTCAAGTCCTTGGAAAGGTTCCTAGAGAACTCACATGTGCTGGAGGTAGGTCTAGTCATGAAGTGGCAAATTACATACAGAGGCAGTTGGCTGATGCTTTAGGGTTTGAGTGCACCAACCTTACAAGGAGGGATAAATATATGATGCTGGCTGGCAATGAAGGGGTTGTTCAAGAAAAGAAGGGGAGAAGATTCTGCTAA 1584 0.4324 MVWLANWVMNQVLVKSCYGFARKLKSHGFHWGDLSSKPLHQPSPFPNIAKCDLECRGSQTLACDFHKVLLRTHSFFPYFMLVAFEGGSIFRAFFLLCSCPMLWILNYEMKLRVMIFISFCGLRMKDMENTSRAVLPKFYLENLNLEAYEVVASVGSRVFFTTMPRVMVEGFLKEYLNADAVIATELHTSGCYFTGLLSKSGLLVKHSALMDYFGDTKPDLGIGNTSLHDQLFISLCKEAYVVINEEGKVMPRNKYPKPLIFHDGRLAFLPTPSATLLMFMWLPLGFLMAIYRIFLGVFLCCKFTLALGIWSGLILNFNDKNQQRSESNKGVLYVCSHRTLMDPIFLSITLGRRLTAVTYSLSKVSELIAPIRTMRLTRDREQDGETMKRLLCEGDLVVFPEGTTCREPYLLRFSSLFAELADEIVPVAMNAHVTMFYGTTASGLKVLDPIFFFMNPWPRYDIQVLGKVPRELTCAGGRSSHEVANYIQRQLADALGFECTNLTRRDKYMMLAGNEGVVQEKKGRRFC* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0874 527 SMART plsc_2 331 432 IPR002123 GO:0016746
Gso18g0874 527 Pfam Acyltransferase 318 424 IPR002123 GO:0016746
Gso18g0874 527 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 1 14 521 - -
Gso18g0874 527 PANTHER ANCIENT UBIQUITOUS PROTEIN 14 521 - -
Gso18g0874 527 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 253 519 - -
Gso18g0874 527 CDD LPLAT 307 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0874 Gso-Chr18 12040219 12043053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0874 1 519 Acyl Lipid Metabolism Gene Families AT1G06520 54.922 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0874 K13508 - gmx:100802208 1075.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0874 18 12040219 12043053 Gso8g2566 8 43118682 43121672 GST
Gso18g0874 18 12040219 12043053 Gso2g2490 2 49348312 49350713 PCT