Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0860 ATGGAGTGGGAAGAGAGGAGCAACAAGGTTGCGTCGGAATTTATAATAAGACTGGGAAATGCAAGGCACAAGAATTTAGTCAGATTGTTGGGGTTTTGCCACAACCCGCATCTAGTCTATCTTTTGTATGATTACTTGCCTAATGGGAACTTGGCTGAGAAAATGGAAATGAAATGGGATTGGGCTGCAAAATTCAGAACAGTAGTTGGAATTGCTAGAGGACTTTGCTTCCTTCACCATGAATGTTACCCAGCTATACCTCATGGTGACTTGAAGGCCAGCAACATTGTCGATGGCAAAAAGAACAAGGTTTATGGGCAGAACCTTTGTTATTTGGCTAAGTTATTTCTTGATCACAAGACCCTCTATTATGATGTAGACCTGTTTCTGTTCTATGTTTTGTGTGAATGTGATGATCAAGGATGTCACATGGTTGGCTATTTCTCCAAGGAAAAACATTCTAAGGAATCTTACAATTTGGCATGTATCCTCACCCTACCACCTTACCAAAGGAAAGGCTATGGCAAATTTCTAATTGCATTCTCATATGAACTGTCCAAAAAGGAGGGCAAAGTTGGCACACCTGAAAGACCCCTTTCAGACCTTGGACTGCTAAGCTACAGAGGATATTGGACCAGGGTTCTCTTAGACATTCTGAAGAAGCACAAGGGAAACATTTCTATCAAGGTACCATATTCTTTTCTATTAATGTTTCTAAGACACAGAAGAATTCATCTATTCTGTTTACAAATAAAGTTCATTTGA 765 0.3974 MEWEERSNKVASEFIIRLGNARHKNLVRLLGFCHNPHLVYLLYDYLPNGNLAEKMEMKWDWAAKFRTVVGIARGLCFLHHECYPAIPHGDLKASNIVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDQGCHMVGYFSKEKHSKESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKVPYSFLLMFLRHRRIHLFCLQIKFI* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0860 254 SUPERFAMILY Protein kinase-like (PK-like) 15 100 IPR011009 -
Gso18g0860 254 PANTHER HISTONE ACETYLTRANSFERASE 76 229 - -
Gso18g0860 254 CDD NAT_SF 132 190 - -
Gso18g0860 254 PANTHER HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 76 229 - -
Gso18g0860 254 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 79 239 IPR016181 -
Gso18g0860 254 Gene3D - 87 217 - -
Gso18g0860 254 Pfam Protein kinase domain 8 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0860 254 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 8 254 IPR002717 GO:0004402|GO:0006355|GO:0016573
Gso18g0860 254 Gene3D Phosphorylase Kinase; domain 1 2 53 - -
Gso18g0860 254 ProSiteProfiles Protein kinase domain profile. 1 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0860 254 Pfam MOZ/SAS family 97 229 IPR002717 GO:0004402|GO:0006355|GO:0016573
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0860 Gso-Chr18 11714613 11716345 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0860 97 229 C2H2 Transcription Factor Family AT5G64610 94.737 5.28e-89 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso18g0860 MOZ_SAS 6.2e-68 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0860 K11308 - mus:103987470 279.256