Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0851 ATGGTTACCATAAAAACTTCTCACACTGTGGTTCCAAATCAACCAACTCCGAAAGGTCGATTATGGCTATCTAATAGTGACAATTCCACACGTCCAGCACATACACCCGTTATTTACATATACAAAGCACAACTCAACATTGAATATGACATTGAGAGAATGAGAGACTCTCTTAGTAAAGTTCTAGTGTACTACTATCCAGTTGCTGGCAGATTGAGCTTAGCAGAAAGTGGTCGAATGGAAGTGGATTGCAACGCAAAGGGAGTGACATTGATTGAAGCCGCAACCGCAAAAACATTTGCTGATTTTGGAGACTTTTCACCCTCTGATTCCATCAAGGAAGAGCTTGTTCCAGCAATTGATTATCATTCTCAACCTATACAAGAGATTCCTTTGCTATTTGTTCAACTAACAAGATTCCAAGGTGACCAACAACAAGGCCTTGCCATTGGAGTTGCTTTCTCACATCCTGTGGCTGATGGGTCTGCTTGGATTCACTTTATGAACACATGGGCAATGGTCAATAGAGGAGACATGTTGGATCTTAATGAAATGCCATTTCTAGATCGAACTATACTCAAATTCCCACCATCATCGTTGCAGTCACTGCCGCCGCCGCACTTTGATCACCCAGAGTTGAAGCCTCTGCCACTCATACTAGGCAAATCTGACAGCACTGAAGAGCAAAACAAGAAGACAGCAGCTTCTATGTTGAAACTCACATCAAAACAAGTGGAGATGTTGAAGAAGAAGGCCAACGATCAATTAACAAAACAAGGGTCAAGACCTTTTAGCAGATTTGAAGCTGTGGCTGCACATATATGGAGATGTGCATGTAAGGCTCGTGAACTACATCACAATCAACCAACTCTTGCTCGGTTCAACGTTGATTTTCGCAATCGATTAATTCCTCCTCTCCCCAGGAATTACTTTGGGAATGCTTTGGTAGCAACAGTGACACCAGAATGTTATGTTGGAGAAATGACAACAAGACCATTGAGCTATGCTGCCCAAAAAATGAGAGAAGCAGTGGCATTGCTTACAGATGAGTACATAAGGTCACACTTAGAAGTTGTATTTGGTGAGGAGCAATTGGATTGCATAAAGGCTTTTTTCTTGGGACAAGGAGAAGGTAGATATGCACCTTTTGGAGGGAATCCGAATCTTCAAATCACAAGCTGGATCAACATGCGGGCGTATGAAACCGATTTCGGGTGGGGAAAGCCTGTGTATTTTGGTTTAGGATATGTGTGTGCATTAGATAGGGGAATTATTATGCGAGGTCCACAAGATGATGGTTCTGTTATTGTGATCATGCATTTCCAGATAGCACATATGCAACTTCTTAAGAAATTCTTCTACGAGGATATATTCACATCAAGGTTGTAA 1389 0.4183 MVTIKTSHTVVPNQPTPKGRLWLSNSDNSTRPAHTPVIYIYKAQLNIEYDIERMRDSLSKVLVYYYPVAGRLSLAESGRMEVDCNAKGVTLIEAATAKTFADFGDFSPSDSIKEELVPAIDYHSQPIQEIPLLFVQLTRFQGDQQQGLAIGVAFSHPVADGSAWIHFMNTWAMVNRGDMLDLNEMPFLDRTILKFPPSSLQSLPPPHFDHPELKPLPLILGKSDSTEEQNKKTAASMLKLTSKQVEMLKKKANDQLTKQGSRPFSRFEAVAAHIWRCACKARELHHNQPTLARFNVDFRNRLIPPLPRNYFGNALVATVTPECYVGEMTTRPLSYAAQKMREAVALLTDEYIRSHLEVVFGEEQLDCIKAFFLGQGEGRYAPFGGNPNLQITSWINMRAYETDFGWGKPVYFGLGYVCALDRGIIMRGPQDDGSVIVIMHFQIAHMQLLKKFFYEDIFTSRL* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0851 462 Gene3D - 221 456 IPR023213 -
Gso18g0851 462 MobiDBLite consensus disorder prediction 1 27 - -
Gso18g0851 462 Gene3D - 1 215 IPR023213 -
Gso18g0851 462 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 457 - -
Gso18g0851 462 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 457 - -
Gso18g0851 462 Pfam Transferase family 1 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0851 Gso-Chr18 11425674 11427385 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0851 2 455 Monolignol Biosynthesis Gene Families AT5G48930 36.264 2.06e-91 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0851 K13065 - gmx:100789491 933.71