Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0850 ATGGTGACCATAAAAGCTTCTCACACTGTGGCTCCAAATCAACCAACACCCCAAGGTCGATTATGGCTATCTAACAGTGACCAAACCGCACGCCCAGCCCACACACCAAACCTTTACATCTACAAAGCAAAACACAACATCATCGAATATGACATTGAGAAAATGATAGACTCTCTTAGCAAAATTTTGGTGCACTACTATCCAGTAGCTGGCAGATTGAGCGTAACAGAAAGTGGTCGAATGGAAGTGGATTGCAACGCAAAGGGAGTGACATTGATCGAAGCCGAAACCGCAAAAACATTTGATGATTTTGGAGACTTCACACCCTCAGACTCCATCAAGGAAGAACTTGTTCCAGTGATTGATTATCACTCTCAACCTATAGAAGAGATTCCTTTGGTATTAGTCCAAGTAACAAGATTCAAAGGTGACCGAAAACAACAAGGCCTTGCCGTTGCAGTGGCTGTTTCTCATCCTGTGGCTGATGGGTATGCTTGGATTCACTTCATCAACACATGGGCAAAGGTTAATAGAGGAGGCATGTTAGATCTTAATGACATGCCATGTCTAGATAGAACTATACGCAGATCATCGTCGTTGTCATCACCGCCACCGCGCTTCGATCACCCTGAATTGAAGCCTCTACCATTTAAACTAGGCAAATCTGACAGCACTGAAGAGCAAAATAAGAAGACAACAGCTGCTGTATTAAAACTCACATCAGAACAAGTGGAGATGTTGAGGAAGAAGGCTAATGAAAATGAAAACCTATCAACAAAGCAAGGGTCAAGATCAAGACCTTGTAGCAGATTTGAAGCTGTGGCTGCACACATATGGAGATGTGCATGCAAGGCTCGTGAACTAGATCGCAATCAACCAACTCTTGTTCGGTTCAACGCCGATTTTCGCAATAGACTAACCCCTCCTCTCCCGAGAAATTATTTTGGGAATGCATTGGCGGCGACAGTGACACCAGAATGTTATGCTGGAGAAATCACATCGAAACCGTTGAGCTATGCCGCCCGGAAAATGAGAGAAGCGGTTGAAATGCTCAAGGAAGAATATATAAGTTCACAGTTAGATATTGCGTTGGGTGAGGAGCAATTGGAGTCCATAAAGGCTTTGTTCTCGAGACAAGGAGAGCGTAGGAATGCCCCTTTTGCAGGGAACCCTAACCTTCAAATCACGAGCTGGATAAACATTCCACTGTATGAAGCAGATTTTGGCTGGGGAAAGCCTGAGCATTTTGTTCTGGGATATGTGTGTCCGTTTGACAGGGGGATTATTATTCAAGGTCCAGAAAATGATGGTTCTGTCATTGTCATCATGTATTTCCAGATATCACATATGCAACTCTTTAAGAAATTCTTCTACGAGGATGTATTCACTTCAAGGTTGTAA 1401 0.4347 MVTIKASHTVAPNQPTPQGRLWLSNSDQTARPAHTPNLYIYKAKHNIIEYDIEKMIDSLSKILVHYYPVAGRLSVTESGRMEVDCNAKGVTLIEAETAKTFDDFGDFTPSDSIKEELVPVIDYHSQPIEEIPLVLVQVTRFKGDRKQQGLAVAVAVSHPVADGYAWIHFINTWAKVNRGGMLDLNDMPCLDRTIRRSSSLSSPPPRFDHPELKPLPFKLGKSDSTEEQNKKTTAAVLKLTSEQVEMLRKKANENENLSTKQGSRSRPCSRFEAVAAHIWRCACKARELDRNQPTLVRFNADFRNRLTPPLPRNYFGNALAATVTPECYAGEITSKPLSYAARKMREAVEMLKEEYISSQLDIALGEEQLESIKALFSRQGERRNAPFAGNPNLQITSWINIPLYEADFGWGKPEHFVLGYVCPFDRGIIIQGPENDGSVIVIMYFQISHMQLFKKFFYEDVFTSRL* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0850 466 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 461 - -
Gso18g0850 466 Gene3D - 1 214 IPR023213 -
Gso18g0850 466 Coils Coil 237 257 - -
Gso18g0850 466 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 461 - -
Gso18g0850 466 Gene3D - 220 460 IPR023213 -
Gso18g0850 466 Pfam Transferase family 1 459 - -
Gso18g0850 466 MobiDBLite consensus disorder prediction 1 28 - -
Gso18g0850 466 MobiDBLite consensus disorder prediction 195 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0850 Gso-Chr18 11386318 11387934 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0850 2 459 Monolignol Biosynthesis Gene Families AT5G48930 37.336 4.83e-97 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0850 K13065 - gmx:100788434 932.554