Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0846 ATGGTAGCCATTGTGGCTTCTTACATTGTCACTCCAAATCAACCAACTCCCAATGATCCTTTATGGATGTCTGATAGTGACCAAATCGGGCACCTACTTCATGTATCCAGTATCTACATTTACAAAGCAAAACACAACAGCCACATAATTGAGAGGATGAGAAACTCTCTTAGCAAGCTTTTGGTGTACTACTATCCTGTAGCTGGCAGGTTGAGCTTGACAAAAAGTGGTCGAATGGAAGTGGATTGTAACGCAAAGGGAGTGACATTGGTTGAAGCTGAAAGCACAAAAAGATTTGGTGATTATGGAGACTTTTCACCCTCTGAGTCCACAGAGGAACTTGTTCCAAAAGTTGATTACACTCAACCTATAGAGGAGATTCCCCTACTGCTACTGCAATTAACAAGGTTCCATGGTGGTGAAGGCCTTGCCATTGGAGTTGTTATGTCTCATCCATTGACTGATGCGATTGGCTTCGTTCACTTCATGAACAGATGGGCAAAGCTGACTCGAGGAGAAGCACAAGAACCTAATGAAATTCCATTTCTTGATCGAACACTACTCAAGTTACCACATCAGCCATCAGCACCAAGCGTTAAACTTCCAGAGTGGAAGCCAGCACCAAAAATACCAGGAAAAGAGCAAACGAGAAGTGCTGCATTGCTTGAGCTCACATCAAACCAGGTACAGAGGCTAAAGGAGAAGGCTAATGATCAATCTTCAAAAGAAGGTTCAAGACCTTATAGCAGATTTGAAGTTGTTGCCGCTCATATATGGAGATGTGCAGCTAAGGCTCGTGAATCTGGTGAGAACCACCCAACTGTCGCTCGGTTTAGTGTTGATTTTCGCAAAAGATTGAATCCACCTCTCCCTCAGAATTTTTTCGGAAATGCTTTGGCAAAAGCAGTGACACCTAAATGTTATGAGAGAGATATCATATCAAACCCATTAAGTTTTGCTGCTCAAAAGATAAGGGAAGGAGCTCATGCAGTTACGGATGAGTATATAAGGTCACAATTAAATGTTATTTTAGGGCAACAGCAATTGGATCAAATAAGGGCTTTTTTCAAGGGACAAGGACACCGTCTGAATGTCCCGTATGCTGGGGATCATAACATCCTACTTACAAGCTGGATTACCATGCCATTGTATGAAGCAGATTTTGGTTGGGGAAAGCCAGTGCTCTTTGGTTTAGCAACTCGGTTTCAAGAAGATAGGGCAGCAATTCTTCCAAACCCAGAAGGATACGGTGTTACTGTCAGCATATTTTTCCAGACAACACTTATGCAGCTCTTCAAAACATTCTTCTATGAGGATATGTAG 1323 0.424 MVAIVASYIVTPNQPTPNDPLWMSDSDQIGHLLHVSSIYIYKAKHNSHIIERMRNSLSKLLVYYYPVAGRLSLTKSGRMEVDCNAKGVTLVEAESTKRFGDYGDFSPSESTEELVPKVDYTQPIEEIPLLLLQLTRFHGGEGLAIGVVMSHPLTDAIGFVHFMNRWAKLTRGEAQEPNEIPFLDRTLLKLPHQPSAPSVKLPEWKPAPKIPGKEQTRSAALLELTSNQVQRLKEKANDQSSKEGSRPYSRFEVVAAHIWRCAAKARESGENHPTVARFSVDFRKRLNPPLPQNFFGNALAKAVTPKCYERDIISNPLSFAAQKIREGAHAVTDEYIRSQLNVILGQQQLDQIRAFFKGQGHRLNVPYAGDHNILLTSWITMPLYEADFGWGKPVLFGLATRFQEDRAAILPNPEGYGVTVSIFFQTTLMQLFKTFFYEDM* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0846 440 Pfam Transferase family 1 437 - -
Gso18g0846 440 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 3 440 - -
Gso18g0846 440 Gene3D - 211 439 IPR023213 -
Gso18g0846 440 Coils Coil 222 242 - -
Gso18g0846 440 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 440 - -
Gso18g0846 440 Gene3D - 1 206 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0846 Gso-Chr18 11255581 11257231 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0846 2 438 Monolignol Biosynthesis Gene Families AT5G48930 35.857 2.92e-84 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0846 K13065 - gmx:100802888 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0846 18 11255581 11257231 Gso8g2588 8 43417661 43419312 GST