Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0845 ATGGTAACCATTGTGGGTTCTTACAATGTCACTCCTAATCAACCAACTCCAAAGGATCCTTCATGGCTATCCGATAGTGACCAAAACGGTGTCCTAGGTCATGTAGCCAATGTCTACATATACGAAGCAAATCCCAACAGCAACACCATTGAGAGATTGAGGAACTCTCTTAGCAAGCTTTTGGTGTACTACTATCCATTCGCTGGCAGATTCAGCTTGACAAAAAGTGGTCGCATAGAAGTGGATTGTAACGCAACGGGAGTGACATTGATTGAAGCTAAAACCTCACACACACTTGATGATTATGGAGACTTTTCACCTTCAAAGTTGACCGAGGAACTTGTTCCAGATATTGATTATACTCCACCCATAGAGGAGATTCCCCTATTACTACTTCAATTCACAAGGTTCCATTGTGGTAAAGGCCTTGCCATTGGAGTTGTTATCTCTCACCCTATGACTGATGCAACCGGCGTCACTCAGTTCATGAATAGATGGGCAAAGCTGGCTCGAGGAGAAGAACTAAACCCTAATGAAATTCCTTTTCTCGATCGAACACTACTCAAATTTCCACACCAGCCATCATCACAACGCGTTGATCAACCAGAGTTGAAGCCTGTACTACAATTAGAGCAAAAGAAGAATGCAAGATGGAGCGGTGCATTGTTAAAACTCAAGTCAAGCCAAGTGGAGAGGCTAAAGAAGAAGGCTAATGATGAACCTTCAAGAGAAGGGGCAAGACCTTATAGCAGATTTGAATCTATTGCTGCTCATATATGGAGATGTGCATCTAAGGCTCGTGCTGAATCTGGTGAGAATTCCAATTCAAACCACCCAACTATAGTTCGGTTTAGTGTTAATTTTCGCAATAGGTTACTGACTCCACCAATCCCTGAGAATTATCTTGGGAATGCTTTGGCAAGAACAATGACACCTAAATGTTATGAGGGAGATATCATATCAAAGCCATTAGGTTATGCTGCTCAAAAGATAAGGGAAGCAGTTAACGCGGTTACGGGTGAGTATGTAAAGTCACAATTAAGTGTTGGTTTAGGGCAAGAGCAAGTGGATCACATTAGGGCTTTTTTCATGGGACAAGGACACGGTACAAAACCGGCGTATGCTAGGGATCATAACATTCTCCTCACAAGCTGGATGAACATGCCAGTGTATGAAGCTGATTTTGGTTGGGGAAAGCCTATGCAATTCACTTTAGCACATGTGTTTCAACAAGTTGATAGGGTAGGGATTTTTCCAAGCCCAGATGGAGACGGTGTTGTTGTCTACCTTAATTTCGAGACAGCACAATTGCAACTTTTGAAGAAGTTGTTCTACGCGGATATGTATGTATCCTCATTATAG 1362 0.4244 MVTIVGSYNVTPNQPTPKDPSWLSDSDQNGVLGHVANVYIYEANPNSNTIERLRNSLSKLLVYYYPFAGRFSLTKSGRIEVDCNATGVTLIEAKTSHTLDDYGDFSPSKLTEELVPDIDYTPPIEEIPLLLLQFTRFHCGKGLAIGVVISHPMTDATGVTQFMNRWAKLARGEELNPNEIPFLDRTLLKFPHQPSSQRVDQPELKPVLQLEQKKNARWSGALLKLKSSQVERLKKKANDEPSREGARPYSRFESIAAHIWRCASKARAESGENSNSNHPTIVRFSVNFRNRLLTPPIPENYLGNALARTMTPKCYEGDIISKPLGYAAQKIREAVNAVTGEYVKSQLSVGLGQEQVDHIRAFFMGQGHGTKPAYARDHNILLTSWMNMPVYEADFGWGKPMQFTLAHVFQQVDRVGIFPSPDGDGVVVYLNFETAQLQLLKKLFYADMYVSSL* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0845 453 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 448 - -
Gso18g0845 453 Gene3D - 203 446 IPR023213 -
Gso18g0845 453 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 448 - -
Gso18g0845 453 MobiDBLite consensus disorder prediction 1 26 - -
Gso18g0845 453 Pfam Transferase family 1 445 - -
Gso18g0845 453 Gene3D - 1 202 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0845 Gso-Chr18 11174657 11176362 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0845 2 445 Monolignol Biosynthesis Gene Families AT5G48930 32.450 7.94e-68 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0845 K13065 - gmx:100803418 904.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0845 18 11174657 11176362 Gso8g2589 8 43436835 43438919 GST