Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0844 ATGGTAACCATTGTGGGTTCTTACAATGTCACTCCTAATCAACCAACTCCAAAGGATCCTTCATGGCTATCCGATAGTGACCAAATCGGTGTCCTAGGTCATGTAGCCAATGTCTACATATACGAAGCAAATCCCAACAGCAACACCATTGAGAGATTGAGGAACTCTCTTAGCAAGCTTTTGGTGTACTACTATCCATTCGCTGGCAGATTCAGCTTGACAAAAAGTGGTCGCATAGAAGTGGATTGTAACGCAAAGGGAGTGACATTGATTGAAGCTAAAACCTCACACACACTTGATGATTATGGAGACTTTTCACCTTCAAAGTTGACCGAGGAACTTGTTCCAGATATTGATTATACTCCACCCATAGAGGAGATTCCCCTATTACTACTTCAATTCACAAGGTTCCATTGTGGTAAAGGCCTTGCCATTGGAGTTGTTATCTCTCACCCTATGACTGATGCAACCGGCCTCACTCAGTTCATGAATAGATGGGCAAAGCTGGCTCGAGGAGAAGAACTAAACCCTAATGAAATTCCTTTTCTCGATCGAACACTACTCAAATTTCCACACCAGCCATCATCACAACGCGTTGATCAACCAGAGTTGAAGCCTGTACTACAATTAGAGCAAAAGAAGAATGCAAGATGGAGCGGTGCATTGTTAAAACTCAAGTCAAGCCAAGTGGAGAGGCTAAAGAAGAAGGCTAATGATGAACCTTCAAGAGAAGGGGCAAGACCTTATAGCAGATTTGAATCTATTGCTGCTCATATATGGAGATGTGCATCTAAGGCTCGTGCTGAATCTGGTGAGAATTCCAATTCAAACCACCCAACTATAGTTCGGTTTAGTGTTAATTTTCGCAATAGGTTACTGACTCCACCAATCCCTGAGAATTATCTTGGGAATGCTTTGGCAAGAACAATGACACCTAAATGTTATGAGGGAGATATCATATCAAAGCCATTAGGTTATGCTGCTCAAAAGATAAGGGAAGCAGTTAACGCGGTTACGGGTGAGTATGTAAAGTCACAATTAAGTGTTGGTTTAGGGCAAGAGCAAGTGGATCACATTAGGGCTTTTTTCATGGGACAAGGACACGGTACAAAACCGGCGTATGCTAGGGATCATAACATTCTCCTCACAAGCTGGATGAACATGCCAGTGTATGAAGCTGATTTTGGTTGGGGAAAGCCTATGCAATTCACTTTAGCACATGTGTTTCAACAAGTTGATAGGGTAGGGATTTTTCCAAGCCCAGATGGAGACGGTGTTGTTGTCTACCTTAATTTCGAGACAGCACAATTGCAACTTTTGAAGAAGTTGTTCTACGCGGATATGTATGTATCCTCATTATAG 1362 0.4236 MVTIVGSYNVTPNQPTPKDPSWLSDSDQIGVLGHVANVYIYEANPNSNTIERLRNSLSKLLVYYYPFAGRFSLTKSGRIEVDCNAKGVTLIEAKTSHTLDDYGDFSPSKLTEELVPDIDYTPPIEEIPLLLLQFTRFHCGKGLAIGVVISHPMTDATGLTQFMNRWAKLARGEELNPNEIPFLDRTLLKFPHQPSSQRVDQPELKPVLQLEQKKNARWSGALLKLKSSQVERLKKKANDEPSREGARPYSRFESIAAHIWRCASKARAESGENSNSNHPTIVRFSVNFRNRLLTPPIPENYLGNALARTMTPKCYEGDIISKPLGYAAQKIREAVNAVTGEYVKSQLSVGLGQEQVDHIRAFFMGQGHGTKPAYARDHNILLTSWMNMPVYEADFGWGKPMQFTLAHVFQQVDRVGIFPSPDGDGVVVYLNFETAQLQLLKKLFYADMYVSSL* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0844 453 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 448 - -
Gso18g0844 453 MobiDBLite consensus disorder prediction 1 22 - -
Gso18g0844 453 Gene3D - 203 446 IPR023213 -
Gso18g0844 453 Gene3D - 1 202 IPR023213 -
Gso18g0844 453 Pfam Transferase family 1 445 - -
Gso18g0844 453 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0844 Gso-Chr18 11135370 11137075 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0844 2 445 Monolignol Biosynthesis Gene Families AT5G48930 32.450 1.53e-68 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0844 K13065 - gmx:100803418 910.983