Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0842 ATGGTAACCACTGTGGCTTCTTACAACGTCACTCCATATCAACCAACTCCCAATGATCCTTTATGGCTATCAGATAGCGACCAACTTGGGGCCCTAGGCCATGTAGCCACCATCTACATTTACAAAGCAAAACCCAACAGCGACACCATTGAGAGGTTGAGAAACTCTCTTAGAAAGCTTTTAGTGTACTACTACCCAGTAGCTGGCAGGTTGAGCTTGACAAAAAGTGGTCGAATGGAAGTGAATTGCAACGCAAAGGGAGTGACGTTGATTGAAGCTGAAACAACAAAAACATTTGGTGATTATGGAGACTTTTCAGCATCCAAGTCGACCGATGAACTTATTCCAAAAGTTGATGATACTCAACCTACAGAAGAGATTCCCTTACTGCTACTGCAAATAACAAGGTTCCATGGTGGTGAAGGCCTTTCCATTGGAGTTCTTTTCTCTCATCCTTTGACTGATGCGACTGGCCAGATTCACTTCATGAACAAATGGGCAAAGCTGACTCGAGGAGAAGAACTAAACCCTGATGAAATGCCATTTCTCGATCGAACACTACTCAAATTATTACCAAATCAGGCATCAGTTCCAAGCGTTAAACTCCCAGAGTTGAAGCCTGCACCACAAACACCAGGAAAAGAGCAGAAGAAGAGAAGTGCTGCATTGCTAAAACTCACATCAAGCCAGATACAGAGGCTAAAGAAGAAGGCTAATGATCACCCTTCAAAAGAAGGGTCCAAACCTTATAGCAGATTTGAAGTTGTTGCTGCTCATATATGGAGATGTGCAACTATGGCTCGTGCTGAATCTGGTGAGAATTCAAACCAACCAATTCTAGTTCGGTTTAGTGTTAATTTTCGCAATAGATTGAAACCACCTCTCCCTCAGAATTATTTTGGGAATGCTTTGGCAAAAGTAGCGACACCTGAATGTTATGAGGGAGATATCATATCAAACCCATTAGGATTCGCTGCTCAAAAGATAAGGGAAGCATCTCATGCAATTACTGAAGACTTTTTAAGGTCACAATTAAATGTTGGTTTAGGCAAATGGCAATTGGACAACATTAGGGCTTTTTTCATGAGTCAACGACACCTTATAAATACGCCCTCTGCTGGGGATCATAACATTTTTCTCACAAGCTTGATGACCATGCCAGTGTATGAATCAGATTTTGGCTGGGGAAAGCCTGTGCATTATGGTTTAGCAAGTCTGTTTCAGGTAAATAGGGCAGGAATTCTTCCAAGCCCAGATGGAGATGGTGTTATTGTTAACATATTTTTCCAGGAAGCACTTATGCAGCTTTTCAAAAAGTTGTTCTACGAGGATTTGTATGTATCCTCATTATAG 1353 0.4169 MVTTVASYNVTPYQPTPNDPLWLSDSDQLGALGHVATIYIYKAKPNSDTIERLRNSLRKLLVYYYPVAGRLSLTKSGRMEVNCNAKGVTLIEAETTKTFGDYGDFSASKSTDELIPKVDDTQPTEEIPLLLLQITRFHGGEGLSIGVLFSHPLTDATGQIHFMNKWAKLTRGEELNPDEMPFLDRTLLKLLPNQASVPSVKLPELKPAPQTPGKEQKKRSAALLKLTSSQIQRLKKKANDHPSKEGSKPYSRFEVVAAHIWRCATMARAESGENSNQPILVRFSVNFRNRLKPPLPQNYFGNALAKVATPECYEGDIISNPLGFAAQKIREASHAITEDFLRSQLNVGLGKWQLDNIRAFFMSQRHLINTPSAGDHNIFLTSLMTMPVYESDFGWGKPVHYGLASLFQVNRAGILPSPDGDGVIVNIFFQEALMQLFKKLFYEDLYVSSL* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0842 450 Gene3D - 210 444 IPR023213 -
Gso18g0842 450 MobiDBLite consensus disorder prediction 200 221 - -
Gso18g0842 450 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 445 - -
Gso18g0842 450 Pfam Transferase family 1 443 - -
Gso18g0842 450 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 3 445 - -
Gso18g0842 450 Gene3D - 1 207 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0842 Gso-Chr18 11012885 11014698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0842 7 443 Monolignol Biosynthesis Gene Families AT5G48930 32.962 2.12e-71 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0842 K13065 - gmx:100802888 907.131