Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0836 ATGATCTCTTCGTTGAGACAGCCTGTTGTAGGGATCAGTGGTTCTGATCTTCTTTTGAGGCAAAGACATGCAACTCCAATTAAGGCAAGGTCGTTTTTACCCTCTTTGTCAAGAGAAAAGGGTCAAGGATCTCTTGTTTCAGTTCAAAAGCCACTGCACATTGGTGCTTCTCTTGGTGTTGGAAATTTTGTGTCAGTGAAGAGTGATGATAAAAGGGGTGATTTGGTGAAGTGTGAGGCCTATGAGGCAGACAGATCAGAGGTTGAGGGTGCAAGCACACCGTCAGAGGCTGCAAAGAAGGTGAAAATTGGGATATATTTTGCAACCTGGTGGGCTCTGAATGTGGTGTTCAATATTTATAACAAGAAGGTTCTGAATGCCTACCCTTACCCTTGGCTTACTTCAACTCTCTCACTTGCATGTGGGTCTCTTATGATGTTGATCTCTTGGGCCACTGGGATTGCAGAAGCCCCCAAGACTGATCCTGAGTTTTGGAAGTCTTTGTTCCCTGTTGCTGTTGCACATACAATAGGACATGTAGCGGCAACAGTTAGTATGTCAAAAGTTGCGGTATCGTTTACACATATTATCAAGAGTGGTGAACCTGCTTTTAGTGTTCTGGTTTCAAGATTTCTTTTGGGTGAGAGCTTCCCTGTGCCTGTCTATCTGTCTTTAATTCCAATCATTGGTGGATGTGCACTTGCTGCTGTGACTGAGCTCAATTTCAATATGATCGGTTTTATGGGAGCTATGATATCGAATTTGGCATTTGTATTCCGTAATATCTTTTCCAAAAAGGGCATGAAGGGAAAGTCTGTCAGTGGAATGAATTACTATGCTTGTTTATCTATTTTGTCCCTTGCAATTCTCACACCCTTCGCAATTGCTGTGGAAGGACCACAGATGTGGGCTGCTGGATGGCAAACAGCTATGTCTCAAATTGGACCCCAATTCATATGGTGGGTAGCTGCTCAAAGTGTATTCTATCATCTATACAATCAAGTGTCGTACATGTCTCTGGATCAGATCTCTCCCTTGACGTTTAGCATTGGAAACACCATGAAACGTATATCTGTCATTGTGTCTTCCATTATTATCTTCCACACACCAGTTCAACCCATCAATGCTCTTGGTGCTGCCATTGCTATCCTTGGAACCTTCTTGTATTCACAGGCGAAACAATAG 1185 0.4304 MISSLRQPVVGISGSDLLLRQRHATPIKARSFLPSLSREKGQGSLVSVQKPLHIGASLGVGNFVSVKSDDKRGDLVKCEAYEADRSEVEGASTPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATGIAEAPKTDPEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGESFPVPVYLSLIPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLAILTPFAIAVEGPQMWAAGWQTAMSQIGPQFIWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0836 394 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 102 393 IPR004696 GO:0016021|GO:0022857|GO:0055085
Gso18g0836 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 293 391 - -
Gso18g0836 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 237 - -
Gso18g0836 394 Pfam Triose-phosphate Transporter family 102 390 IPR004853 -
Gso18g0836 394 PANTHER SOLUTE CARRIER FAMILY 35 38 393 - -
Gso18g0836 394 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 38 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0836 Gso-Chr18 10814598 10819390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0836 37 393 Antiporters AT5G54800 80.769 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0836 K15283 - gmx:100801832 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0836 18 10814598 10819390 Gso8g2592 8 43507183 43511803 GST
Gso18g0836 18 10814598 10819390 Gso14g0220 14 1911896 1916376 PCT
Gso18g0836 18 10814598 10819390 Gso2g2451 2 49041440 49045977 PCT
Gso14g0220 14 1911896 1916376 Gso18g0836 18 10814598 10819390 PCT
Gso2g2451 2 49041440 49045977 Gso18g0836 18 10814598 10819390 PCT