Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0820 ATGGACCAAAATATGTTACTATTTATTCTTTTAGCTTTTCCCATCTTGCTGTTATTTTTCTTTAGAAAACACAAAACATCTAAGAAGCAATGCTTACCACCAGGCCCTAGAGGCCTTCCCTTCATTGGCAATCTTTATCAATTCGATAGTTCTACTCTCTGTTTGAAACTCTATGACCTCTCAAAAACATATGGTCCCATCTTCTCCCTTCAACTTGGTTCAAGGCCAACCCTAGTTATTTCCTCACCGAAACTCGCCAAGGAGGTGATGAATACCCATGACCTTGAATTCTGTGGTCGACCCTCCCTCATAAGCTCAATGAAATTTTCATATAACGGGCTAGACATGGCATTTTCACCCTATAGAGATTATTGGAGACACACAAGAAAAATATCCATTATCCATTTCCTTAGCCTCAAGCGTGTGCTAATGTTTTCCTCAACAAGAAAATATGAGGTTACCCAGTTGGTAAAAAAGATAACGGAACACGCTTCTTGTTCCAAGGTTACCAACTTGCACGAGTTACTGACGTGTCTAACAAGCGCTATAGTGTGTAGGACTGCTTTGGGAAGAACGTACGAAGGGGAAGGGATTGAGACAAGCATGTTCCATGGCCTGCTTAAAGAAGCACAGGATTTGATATCTTCCACTTTCTACACTGATTATATTCCATTTGTTGGGGGAGTGATTGATAAACTCACCGGATTGATGGGTCGTCTTGAGAATTTGTTCAAGGTGTTGGATGGCTTTTATCAGAATGTTATTGATGAACACCTTGATCCTGAAAGGAAGAAACTCACGGATGAAGAGGATATAATTGATGCCTTGCTTCAATTGAAGGATGATCCTTCCTTCTCAATGGATCTTACTCCTGCTCACATCAAACCCTTGATGATGAATATAATTTTAGCAGGAACAGATACAAGTGCAGCCGCAGTAGTTTGGGCTATGACGGCACTGATGAAGAGCCCTAGAGTAATGAAGAAAGCCCAAGAAGAGATTAGAAATGTGTTTGGTGAGAAAGATTTTATAGGGGAAGATGATATTCAAAAGCTTCCTTATCTTAAGGCAGTTATAAAAGAAACAATGAGAATGTACCCACCACTGCCTCTTCTTATACATAGGGAAACGATTAAAAAGTGTAGCATTGAAGGGTACGAAATTCCAGAGAAGACATTGGTGTATGTGAATGCTTGGGCAGTGCATAGAGACCCAGAAACATGGAAGAAGCCAGAAGAGTTTTATCCTGAGAGGTTCCTAGACAGCAAAATAGATTTTAGGGGATATGATTTCGAGTTTATTCCATTTGGTACTGGACGAAGGATTTGCCCGGGTATCAATATGGGAATTATCACAGTGGAGCTTGTGCTTGCTAATCTTCTCTATTCTTTTGATTGGGAAATGCCTCAAGGGATGGAAAGGAAAGACATAGACACTGATATGCTTCCAGGACTTGTCCAACACAAGAAAAATCCTCTCTGCCTAGTTGCTAAGAAGCGAGGGTGA 1506 0.407 MDQNMLLFILLAFPILLLFFFRKHKTSKKQCLPPGPRGLPFIGNLYQFDSSTLCLKLYDLSKTYGPIFSLQLGSRPTLVISSPKLAKEVMNTHDLEFCGRPSLISSMKFSYNGLDMAFSPYRDYWRHTRKISIIHFLSLKRVLMFSSTRKYEVTQLVKKITEHASCSKVTNLHELLTCLTSAIVCRTALGRTYEGEGIETSMFHGLLKEAQDLISSTFYTDYIPFVGGVIDKLTGLMGRLENLFKVLDGFYQNVIDEHLDPERKKLTDEEDIIDALLQLKDDPSFSMDLTPAHIKPLMMNIILAGTDTSAAAVVWAMTALMKSPRVMKKAQEEIRNVFGEKDFIGEDDIQKLPYLKAVIKETMRMYPPLPLLIHRETIKKCSIEGYEIPEKTLVYVNAWAVHRDPETWKKPEEFYPERFLDSKIDFRGYDFEFIPFGTGRRICPGINMGIITVELVLANLLYSFDWEMPQGMERKDIDTDMLPGLVQHKKNPLCLVAKKRG* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0820 501 Gene3D Cytochrome P450 25 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0820 501 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0820 501 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0820 501 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0820 501 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0820 501 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0820 501 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0820 501 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0820 501 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0820 501 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0820 501 PANTHER CYTOCHROME P450 71B11-RELATED 4 499 - -
Gso18g0820 501 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0820 501 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0820 501 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0820 501 Pfam Cytochrome P450 33 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0820 501 SUPERFAMILY Cytochrome P450 33 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0820 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Gso18g0820 501 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 4 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0820 Gso-Chr18 10494603 10497173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0820 6 499 Cytochrome P450 AT4G31500 45.674 1.65e-158 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0820 - - gmx:100798287 1004.59