Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0804 ATGTGGTTGGCACAGCATTATACTCGCGTGCTACAAGCAACACTCACGACTACCAAAACTATTGAGCAATACCATCGTAGCTCTTTTACTCCTCAAGACGAACACGTTGAATGTGAAACTCAGAGCTGGTACCAAGAGGTGTCAAAGCTAAAGGCAAAGTATGATTCTCTTCAAAGGACCCAGAGGCATTTGCTTGGGGAAGATGTTGGACCATTGAACATAAAGGAGCTGCAGAATCTTGAGAAACAGCTTGAAGGGTCATTAGCACAACCAAGGCAAAGGAAGGTTGTAAAGCATGTGCCTATATACAAGAACTGA 318 0.4371 MWLAQHYTRVLQATLTTTKTIEQYHRSSFTPQDEHVECETQSWYQEVSKLKAKYDSLQRTQRHLLGEDVGPLNIKELQNLEKQLEGSLAQPRQRKVVKHVPIYKN* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0804 105 PANTHER MADS-BOX TRANSCRIPTION FACTOR 6 17 95 - -
Gso18g0804 105 Pfam K-box region 39 95 IPR002487 GO:0003700|GO:0005634|GO:0006355
Gso18g0804 105 ProSiteProfiles K-box domain profile. 40 105 IPR002487 GO:0003700|GO:0005634|GO:0006355
Gso18g0804 105 PANTHER SERUM RESPONSE FACTOR HOMOLOG 17 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0804 Gso-Chr18 10059027 10062447 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0804 13 95 MADS-box Gene Family AT2G45650 51.190 4.32e-21 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0804 K09264 - gmx:100784410 163.31