Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0795 ATGCTCTTATCTTTTCTATTTGAAGTGTGTATTCTCAATCTCATCCTTTCTTCAACTATGACCAAGTGGTTTTATGGGATAATGGGAGCAACAACATGGTGTAAGGAAGTTTTTTCTATGAGGGTTTTGGCTGGCAGTGGCGGTTATGCTGTTGATCTTTTCATAAAAGTTGTCATTGCTGAATTTACTTGCATTCTGGCACTAGGAGGGTCCATAGTGGGGATAATTGCAGGAGCTATCAAAGGCCATACCAGAGGAGCTGGTTTTCTTGATGGAGCTTGCAAAGGAGCTGTCACAGGGGCCATTGCAGCACTAGAATTGCTAAATATTGCTGCTTATGATGAGCCACTGTCTAAGGTAGCCCTATTGAGGAGTTTATTAAATGGAAAGCTATTTATGGAATGGATATGTCCAGCTGTTGCACAAGCCTATCATTGTCATATCAGTGCACATGCAACAACTTACAGAGAAGAATCAGATATTTACAATGACAATATTGTCAGGGAAATCACAGTCGAAGGGGTGGCTTGGAATATCATTCAAAAGCCTCCTGTTCAACAATTCAATTCCAGTAAAATGTTCAAATTATACAATGACTCTTGCTGCTCAATATGCTTCCAGGATTTTGAGGATGAAGAATTTGTGAGGACACTTCCAAAATGTGGCCACTTTTTTCACTTAGTCTGCATAGACAAATGGCTAGTCCAACGAAGATCATGCCCCATGTGTAGAATTTATGTTCCAGATTTATGA 753 0.3997 MLLSFLFEVCILNLILSSTMTKWFYGIMGATTWCKEVFSMRVLAGSGGYAVDLFIKVVIAEFTCILALGGSIVGIIAGAIKGHTRGAGFLDGACKGAVTGAIAALELLNIAAYDEPLSKVALLRSLLNGKLFMEWICPAVAQAYHCHISAHATTYREESDIYNDNIVREITVEGVAWNIIQKPPVQQFNSSKMFKLYNDSCCSICFQDFEDEEFVRTLPKCGHFFHLVCIDKWLVQRRSCPMCRIYVPDL* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0795 250 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 164 249 IPR013083 -
Gso18g0795 250 SMART ring_2 202 243 IPR001841 -
Gso18g0795 250 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 27 247 - -
Gso18g0795 250 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 27 247 IPR044523 -
Gso18g0795 250 SUPERFAMILY RING/U-box 194 248 - -
Gso18g0795 250 ProSiteProfiles Zinc finger RING-type profile. 202 244 IPR001841 -
Gso18g0795 250 Pfam Ring finger domain 202 244 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0795 Gso-Chr18 9827805 9829971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0795 53 247 C3H Transcription Factor Family AT5G66070 34.804 5.43e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0795 - K19041 gmx:100799697 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0795 18 9827805 9829971 Gso8g2624 8 43892660 43894879 GST