Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0778 ATGTGGCTTTCGGATCATCGATTGTTTCTTCTCTGCATTGTTTGTGGCCTTTACTTTTCTCTGCAGTTCACAACGGGTCATGCAGATTCAAATGCTGGAAGAACTTTGAATCAGGAGGGTGGTGATCATCAAATACATTGCTCTAGAGAAAGAAGTAGAACAGCTTGGAAAATCATTCAAGAGTATTTGATGCCCTTTGTGGAGAAAGAAAAATACCACATCTCAAAAAGGTGTAGGCTTCACCCTGACAATGACATATACAGAGATCAGGAGCAACATAAGTTTCATACAGATATAAACGAATGGCAGTGTGGGTTCTGTAAGAAAAGTTTCTATGAAGAGAAACATCTTGACCAGCATTTTGACAACAGACACTCCAATTTGCTTAATTTGAGTGAAAGCCAGTGCATAGCAGATGTTTGTGGTGCACTGCACTGTGACCATGAAATGAATTCTGGATCAAAAAAATCAAAGTGCAATCCTGCTGCTGCTGCAAAAAATAAACATCTATGTGAGAGCTTAGCCGATAGTTGTTTTCCTGTCACCGAGGGCCCTGCGGCAAGCCGACTTCATGAATTCTTCTTGCACCAATTCTGTGATGCACACAGCTGCACTGGAAATAGGAAACCTTTCTCCAGAGGGCGCAGGAAGAAGACAAATGTGTTCTACATCTTTGTGTCTATTTTGCTGGTGATACTGCTGCTACTATACTACCTCTACATTTACTTATATCAGAGAGGAATGAAAAGGGAAACTCAAGTGCTGAAGCGCGTCTCACAAGCCAGCAGAAAGAAAAAGCCATCTTAA 807 0.4139 MWLSDHRLFLLCIVCGLYFSLQFTTGHADSNAGRTLNQEGGDHQIHCSRERSRTAWKIIQEYLMPFVEKEKYHISKRCRLHPDNDIYRDQEQHKFHTDINEWQCGFCKKSFYEEKHLDQHFDNRHSNLLNLSESQCIADVCGALHCDHEMNSGSKKSKCNPAAAAKNKHLCESLADSCFPVTEGPAASRLHEFFLHQFCDAHSCTGNRKPFSRGRRKKTNVFYIFVSILLVILLLLYYLYIYLYQRGMKRETQVLKRVSQASRKKKPS* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0778 268 ProSitePatterns Zinc finger C2H2 type domain signature. 104 125 IPR013087 -
Gso18g0778 268 PANTHER ZINC FINGER PROTEIN-RELATED 7 268 - -
Gso18g0778 268 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 7 268 - -
Gso18g0778 268 ProSiteProfiles Zinc finger C2H2 type domain profile. 102 127 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0778 Gso-Chr18 9549708 9553954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0778 24 268 C2H2 Transcription Factor Family AT5G63280 59.677 1.43e-108 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0778 - - gmx:100527694 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0778 18 9549708 9553954 Gso8g2639 8 44053273 44057438 GST