Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0774 ATGGATAGGGAAAAGTATGATGAGGTGCTAGAAGCATGTTCCTTGACAAAAGACCTTGAGGTTCTACCATTTGGTGATCAGACCACTATCGGAGAGAAGGGAATCAATTTGAGTGGTGGACAGAAGCAAAGAGTGCAAATAGCTCGTGCTCTATACCAAGATTCTGATATATATATGTTTGATGATCCCTTCAGTGCATTGGATGCTCATACAGGATCCCATCTCTTTAAGTGCTTGCTTGGCCTTTTAAAATCAAAAACTGTGATTTATATAACTCATCAAGTAGAGTTCTTATCCGATGCTGATCTAATAGTGGTCATGAGAGAAGGAAGAATAACTCAATCAGGAAAATACAATGACATTCTCAGGTCAGGCACTGATTTTATGGAACTTGTAGGTGAACACAAAGCAGCTTTGTCTTCAATCAAGTCCTTTGAGAGAAGGCCAACATTTAAAACATCAACTACCACCAAGGAGGACACAAGTTCAGTAAGTTATGACATAGTTAAACCCAAAGGACAACTAGTTCAAGAAGAAGAACGGGAAAAGGGTAGAGTAGGGTTTAATGTCTACTGGAAATACATCACAACAGCTTATGGAGGAGCTCTTGTACCCATCATATTACTTTCAACGATACTCACTGTGGCTTTTCAGATTGCTAGCAATTATTGGATGATTTTGGCTACTCCTATGTCTGCAACTGCAGAACCTGATATTGGAAGCTTTAAACCTATGGTTGTCTATGTTGCTTTGTCAATTGGAAGTTCCATTTTCACCTTTGCCAAAGCATTTCTTGTTGTGATAGCTGGATACAAGACAACCACTGTGATCTTTAATAAAATGCATTTGTGCATTTTTCGAGCACCAATATCATATTTTGATGCCACCCCGAGTGGGCGAATCCTTAATAGAGTATGTCATACTATGTTGACAATTTTCATGGTTTAA 948 0.3871 MDREKYDEVLEACSLTKDLEVLPFGDQTTIGEKGINLSGGQKQRVQIARALYQDSDIYMFDDPFSALDAHTGSHLFKCLLGLLKSKTVIYITHQVEFLSDADLIVVMREGRITQSGKYNDILRSGTDFMELVGEHKAALSSIKSFERRPTFKTSTTTKEDTSSVSYDIVKPKGQLVQEEEREKGRVGFNVYWKYITTAYGGALVPIILLSTILTVAFQIASNYWMILATPMSATAEPDIGSFKPMVVYVALSIGSSIFTFAKAFLVVIAGYKTTTVIFNKMHLCIFRAPISYFDATPSGRILNRVCHTMLTIFMV* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0774 315 Gene3D - 1 157 IPR027417 -
Gso18g0774 315 Pfam ABC transporter 25 64 IPR003439 GO:0005524
Gso18g0774 315 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 313 - -
Gso18g0774 315 SUPERFAMILY ABC transporter transmembrane region 203 312 IPR036640 GO:0005524|GO:0016021
Gso18g0774 315 Pfam ABC transporter transmembrane region 206 305 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso18g0774 315 Gene3D ABC transporter type 1, transmembrane domain 168 313 IPR036640 GO:0005524|GO:0016021
Gso18g0774 315 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 1 313 - -
Gso18g0774 315 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 206 305 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso18g0774 315 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 132 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0774 Gso-Chr18 9479491 9480789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0774 22 166 Calmodulin-binding Proteins AT2G36910 30.263 5.26e-19 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0774 - K05666 gmx:100811450 529.25