Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0770 ATGGATAAATTAAAGGAAATTGCAGCGTCCTTGGCTGTTGATTATTTGCTTCCACCCTTGAAGAAAGCTGTGAACTCAGTCATGGAGGTTCCAAAAGATGTTGCAGACATGAAAGACAAACTTGATGGGATTCAAGCCATCATTCATGATGCAGATAAGATGGCAGCAGCTGAAGACAGCAAATCATGTGACGAAATCAAAGCAAAGGTGAAGCAGCTTGTGGAAACATCTTTTCGCATGGAAGATATCGTTGATGAATACACCATCCATGAGGAAAAGCAGCTTGGTGATGATCCTGGATGTGCAGCTTTACCTTGTAAGGCTATTGATTTTGTCAAAACTACGGCCTCTCGTCTTCAATTTGCATACATGAACGAGGACGTGAAATCCGAATTTGGTGGAATCAAGGAGAGGAATGGAAGTGAAGATAGCTCCCAAATCCAATCTTCTGGAGGAAACCAAAACATCCCGTTCGATAACCTTCGAATGGCTCCTCTGTATCTTAAGGAGGCTGAGGTTGTGGGCTTTGACGGCCCTAGAGATACATTGGAAAAATGGTTGAAAGAGGGACAAGAAAAGCGCACTGTCATCTCTGTGGTAGGAATGGGAGGACTCGGAAAAACTACTCTTGCCAAGAAAGTTTTTGACAAAGTCCGAACACATTTCACTCTCCATGCATGGATCACAGTGTCTCAATCCTACACCATAGAAGGACTGTTGAGGAATATGTTGCTCAAGTTTGCAGAAGAAGAAAAAAGAGTAGTGGATCATTCTCAGAGTGTTCCTACAATGGATCAAATAAATAAAATGGATAAATGGTCATTGACAGATGAAGTGAGAAATCACTTGCGCCACAAGAGGTATGTTGTTGTGTTTGATGACGTGTGGAATACTCTTTTTTGGCAAGAAATGGAGTTTGCTTTAATTGATGATGAAAATGGAAGTAGGATATTAATGACAACCAGAAATCAGGATGTTGTTAATTCCTGTAAGAGATCTGCTGTTATTCAAGTGCATGAGCTGCAACCTTTAACTCTTGAAAAATCATTGGAATTGTTTTATACAAAGGCATTTGGATCTGACTTTAATGGACGTTGTCCAAGCAATCTTAAGGACATATCCACTGAAATTGTAAAAAAGTGTCAAGGCTTACCACTAGCAATTGTGGTCATTGGTTGTCTTTTATTCGACGAAAAAAGAGAAATACTTAAATGGCAGAGGTTTTATCAAAATCTAAGTTGTGAACTAGGAAAAAATCCCAGTTTATCTCCCGTGAAAAGGATTTTGGGTTTCAGTTATCATGATTTGCCTTACAATCTCAAACCATGCTTCTTGTATTTTGGAATATATCCAGAAGATTACAAAGTTGAACGCGGGAGATTGATTCTACAATGGATAGCTGAGGGGTTTGTTAAATCTGAAGCAACAGAAACTTTAGAGGAAGTGGCAGAAAAATATTTAAATGAGTTGATCCAAAGAAGTTTGGTTCAAGTATCTTCATTTACTAAGGGTGGCAAAATTAAAAGCTGTGGTGTTCATGACCTAGTACATGAAATTATCCGTGAGAAAAATGAAGATTTAAGCTTTTGCCATTCTGCGAGTGAGCGTGAGAACTTGTCAAGAAGTGGGATGATTCGTCGCCTAACAATAGCATCCGGTTCCAACAATTTGGTGGGAAGTGTTGTAAACTCAAACATTCGATCACTTCATGTTTTTAGTGATGAAGAATTATCAGAATCCTCGGTGAAGAGAATGCCTACAAACTACAGGTTATTAAGGGTACTTCATTTTGAAGGCGATTCACTGTATAATTATGTTCCGCTCACGGAAAATTTTGGGGATTTATCCCTTTTGACGTACTTAAGCTTCAGAAATTCAAAGATAGTAAATCTTCCAAAATCAATAGGCGTGTTGCACAACCTAGAAACATTGGATCTAAGAGAATCTCATGTGCTTATGATGCCAAGAGAGTTCTACAAGCTTAAAAAGTTAAGACACCTTTTAGGGTTTCGGCTTCCAATAGAGGGTAGCATTGGAGATTTAACGTCCCTAGAAACACTGTGTGAAGTGGAAGCAAACCATGATACAGAAGAAGTAATGAAAGGGTTGGAAAGACTTACACAATTAAGGGTGTTGGGCTTGACCCTTGTTCCGCCACATCACAAAAGTTCTCTGTGCTCCTTGATAAACAAGATGCAACGCCTGGACAAGTTATACATTACTACTCCATTGGCATTATTTATGCGCATTGATTTGCAATTTGATGTATGTGCACCTGTGCTTCAGAAGGTTCGCATTGTAGGGGGGTTGAAGGAGTTCCCAAACTGGGTTGCCAAGCTCCAAAATCTTGTTACGTTGTCCTTGAGACGCACCTATTTGACTGTTGATCCATTGCCTCTACTTAAGGAGCTACCATATTTGTCATCCCTCTTTATTAATCGTAGTGCATACGAGGGTAAAGTTTTGCAGTTCCCAAACAGGGGGTTTCAGAACCTAAAGCAAATACTACTGGGAAGCCTTTTTATTTTGAAATCCATCGTTATTGAAGATGGAGCATTGCCTTCTCTCGAAAAGTTCAAGTTAGTCGGAATTCCCGAACTGAAGGAGGTGCCTTCTGGTCTCTACAAGTTACCAAAGCTTGAGGTTTTCCATGCTATCAATATGTCAGATGAATTTCAAGAAAACTTTAATCTCAACAGAGGACAAGGTCAATGGATAATAGAATGA 2727 0.3953 MDKLKEIAASLAVDYLLPPLKKAVNSVMEVPKDVADMKDKLDGIQAIIHDADKMAAAEDSKSCDEIKAKVKQLVETSFRMEDIVDEYTIHEEKQLGDDPGCAALPCKAIDFVKTTASRLQFAYMNEDVKSEFGGIKERNGSEDSSQIQSSGGNQNIPFDNLRMAPLYLKEAEVVGFDGPRDTLEKWLKEGQEKRTVISVVGMGGLGKTTLAKKVFDKVRTHFTLHAWITVSQSYTIEGLLRNMLLKFAEEEKRVVDHSQSVPTMDQINKMDKWSLTDEVRNHLRHKRYVVVFDDVWNTLFWQEMEFALIDDENGSRILMTTRNQDVVNSCKRSAVIQVHELQPLTLEKSLELFYTKAFGSDFNGRCPSNLKDISTEIVKKCQGLPLAIVVIGCLLFDEKREILKWQRFYQNLSCELGKNPSLSPVKRILGFSYHDLPYNLKPCFLYFGIYPEDYKVERGRLILQWIAEGFVKSEATETLEEVAEKYLNELIQRSLVQVSSFTKGGKIKSCGVHDLVHEIIREKNEDLSFCHSASERENLSRSGMIRRLTIASGSNNLVGSVVNSNIRSLHVFSDEELSESSVKRMPTNYRLLRVLHFEGDSLYNYVPLTENFGDLSLLTYLSFRNSKIVNLPKSIGVLHNLETLDLRESHVLMMPREFYKLKKLRHLLGFRLPIEGSIGDLTSLETLCEVEANHDTEEVMKGLERLTQLRVLGLTLVPPHHKSSLCSLINKMQRLDKLYITTPLALFMRIDLQFDVCAPVLQKVRIVGGLKEFPNWVAKLQNLVTLSLRRTYLTVDPLPLLKELPYLSSLFINRSAYEGKVLQFPNRGFQNLKQILLGSLFILKSIVIEDGALPSLEKFKLVGIPELKEVPSGLYKLPKLEVFHAINMSDEFQENFNLNRGQGQWIIE* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0770 908 MobiDBLite consensus disorder prediction 134 156 - -
Gso18g0770 908 PANTHER - 35 892 - -
Gso18g0770 908 Pfam NB-ARC domain 181 434 IPR002182 GO:0043531
Gso18g0770 908 Gene3D - 8 122 - -
Gso18g0770 908 PRINTS Disease resistance protein signature 196 211 - -
Gso18g0770 908 PRINTS Disease resistance protein signature 282 296 - -
Gso18g0770 908 PRINTS Disease resistance protein signature 381 395 - -
Gso18g0770 908 PRINTS Disease resistance protein signature 636 652 - -
Gso18g0770 908 Gene3D - 433 525 IPR036388 -
Gso18g0770 908 Gene3D - 166 338 IPR027417 -
Gso18g0770 908 Gene3D Ribonuclease Inhibitor 555 899 IPR032675 -
Gso18g0770 908 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 447 IPR027417 -
Gso18g0770 908 SUPERFAMILY L domain-like 512 887 - -
Gso18g0770 908 Pfam Rx N-terminal domain 11 94 IPR041118 -
Gso18g0770 908 PANTHER DISEASE RESISTANCE PROTEIN RP 35 892 IPR044974 GO:0006952
Gso18g0770 908 Gene3D - 344 432 IPR042197 -
Gso18g0770 908 MobiDBLite consensus disorder prediction 139 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0770 Gso-Chr18 9396132 9452861 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0770 197 400 WRKY Transcription Factor Family AT5G45050 27.451 5.89e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0770 K13457 - gmx:100784361 1778.07