Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0766 ATGGAGACAATAGCAAAGGATATTGCAGTGCCTTTGGCTGCTGAGCATTTGCTTCCACGCTTGAAGAAAGCACTGAATGCGGTCATGAACGTCCCAAAAGATGTTGCTGACATGAAAAACAAACTTGATAGGATTCAATCCATCATTCATGATAAAGAGAAGAAGGCTGCAGATGAAGAAGGCAACTCGCGTTTTCGAACCAAGGCAGAGGTGAAACAGCTGGTGGAAACATCGTTTCACATGGAAGATATTATTGATGAATGCACCATCGTTGAGGAAAGGCAGCTTCCTGATGATGATGGATGTGTAGCTCTACCTTGCAAGGCCGTTGATTTCGTCAAAACTAAGGCCTCTTGCCTTCATTTTGCGTATATGAATGAGGGAGTTGAATCAGAATTTGCTGCAATGAAGGACAAAAATGAGAGCGAGTTTGTCTCCCAAGCGCATCCTCCTGGAGGAAACCAAAACTCCATGTTCCGTAACCTTCGAGATGCTCCTCTTTACATCAAGGATGATGAAGTTGTGGGCTTTGATGTCGCAAGAAAAGAATTGATTGGTTGGTTAGATAGTGACAGATCAGAGCGCACAGTCATCTCTGTGGTAGGAATAGGAGGACAAGGAAAAACAACTCTTGCCAAGAAAGTTTTTGACAAGGTGGCTGAGAAGTTCAAACGCCATGCATGGATCACAGTGTCTCAGTCCTACACAGAGGTAGGACTGTTGAGGGACCTGTTGCAGGAGTTGCGCAAAGAAAACAAGGAGAATCATCCACAAAATCTTTCTACAATGGATCGGAAGTCACTGAGAGATGAAGTCATAAACCATTTGCGCGACAAGAGGTATGTTGTTGTGTTTGATGACGTGTGGAATACAAGTTTTTGGGATGACATGGAATTTGCTTTAATAGATGATAAAATAGGAAGTAGGGTCTTTATCACAACCAGAAACAAGGAGGTTCCAAATTTCTGTAAGAGATCTGCCATTGTTCTTCAGCATGACCTGCAACCTTTAACTCTTGAACAATCTTTGAATTTGTTTTATAAAAGGGCATTTGGATCTGACTTGGGTGGACGTTGTCCAGATCATCTTAAGGACATATCCGCTGAAATGGTTAAAAAGTGTGGAGGTTTGCCACTGGCAATTGTGGCCATTGGTGGTCTTTTATCTCGCATAGAAAGAGATGCAACCTGCTGGAAAAAGTTTAGTGAAAATCTAAGCAAAGAACTAGAGGATGATCTATCTCCTGTGACGAAAATTCTGAGTTTCAGTTATCATGATTTGCCTGACAATCTCAAACCATGCTTCTTGTATTTTGGAGTATATCCAGAAGATTATGAAGTTGAAAATGTAAGATTGATTCGACAATGGGTAGCTGAGGGATTCATCAAATTTGAAGCTGATAAAACTTTAGAGGAAGTTGCAGAACAATATTTAAGAGAGTTGATTCAGAGAAGTTTGGTTCAAGTATCCTCATTTACTGGTGATGGAAAACCTAAATTTTGTCGTGTTCATGATTTAGTACGAGACATGATCCTTAAAATTGCTGTAGATTTAAGTTTTTGTCATTTTGCCAGAGAGAATGAGAATCTGTCAGAGAGTGGGATTATCCGTCGGCTAACAATAGCATCTGGTTCCATCGATTTGATGAAAAGTGTTGAAAGCTCTAGCATTCGATCTCTACATATTTTTAGAGATGAATTATCAGAATCCTATGTGAGTAGTATCCTTATGAAGAAGTACAGGTTTCTAAAGGTACTTGATTTTGAAAAAGCTGCATTGTTTAATTGTGTTCCAGAACATTTGGGGGATTTATTCCTTTTGAGGTACTTAAGCTTCAGAAACACAAAGCTAAACGATCTTCCAACATCAATTGGTATGCTCCACAACCTAGAGACCTTGGATCTAAGGCAAACTATGGTGCGCAAGATGCCAAGAGAGATTAACAAGCTTAAAAAACTAAGACACCTTCTAGCTTATGATATGTCTAAAGGGGTTGGGTATGGGCTTCAAATGGAGAACGGAATTGGAGACCTAGAATCTCTACAAACACTACGTGAAGTGGAAACAAATCATGGTGGAGAAGAAGTATTTAAAGAGTTGGAAAGACTTACACAAGTAAGGGTTCTTGGCTTGACCAATGTTCAGCAAGGATTCAGAAATGTTCTGTACTCCTTGATAAACAAGTTGCAGCACATGGAGAAGCTATACATTGCTGCAATAGATGAACATGAAGTCATTGATTTGAATTTTATTGTATCTGAGCTTGTATTTCAGAATAGTCAATTACAGAAGGTTCGTCTTGTAGGGAGGTTAAATGGGTTCCCAAACTGGGTTGCCAAGCTACAAAATCTTGTTATGTTGTCCTTGTCACACTCCAAGTTAACTGATGATCCATTGGGATTACTTAAAGATCTACCAAATTTGTTGTGCCTCAGTATCCTTTACTGTGCATATGAAGGGAGCTGTTTGCATTTTCCAAACGGGGGGTTTCCAAAGCTAGAACAAATAATAATCAGACGCTTGTATAAGTTGAATTCCATCAGTATTGAAAATGGAGCATTGCCTTCTCTCAAAAAGTTGAAGTTAGTTAGTATCTCCCAACTGACGGAGGTGCCTTCTGGTGTCTGCAGCTTACCAAAGCTTGAGGTTTTCCATGCAATTAATATGTCAAATGAATTTGAAGAAAACTTTCATAGCAACCGAGGACAACGTGCTCAATGGATAATAGAGCAGGTGCCATTTGTAAGTATTGTCGATCGATTTTGGCGTGAAGAAAACTCCAACTTCTAA 2790 0.3975 METIAKDIAVPLAAEHLLPRLKKALNAVMNVPKDVADMKNKLDRIQSIIHDKEKKAADEEGNSRFRTKAEVKQLVETSFHMEDIIDECTIVEERQLPDDDGCVALPCKAVDFVKTKASCLHFAYMNEGVESEFAAMKDKNESEFVSQAHPPGGNQNSMFRNLRDAPLYIKDDEVVGFDVARKELIGWLDSDRSERTVISVVGIGGQGKTTLAKKVFDKVAEKFKRHAWITVSQSYTEVGLLRDLLQELRKENKENHPQNLSTMDRKSLRDEVINHLRDKRYVVVFDDVWNTSFWDDMEFALIDDKIGSRVFITTRNKEVPNFCKRSAIVLQHDLQPLTLEQSLNLFYKRAFGSDLGGRCPDHLKDISAEMVKKCGGLPLAIVAIGGLLSRIERDATCWKKFSENLSKELEDDLSPVTKILSFSYHDLPDNLKPCFLYFGVYPEDYEVENVRLIRQWVAEGFIKFEADKTLEEVAEQYLRELIQRSLVQVSSFTGDGKPKFCRVHDLVRDMILKIAVDLSFCHFARENENLSESGIIRRLTIASGSIDLMKSVESSSIRSLHIFRDELSESYVSSILMKKYRFLKVLDFEKAALFNCVPEHLGDLFLLRYLSFRNTKLNDLPTSIGMLHNLETLDLRQTMVRKMPREINKLKKLRHLLAYDMSKGVGYGLQMENGIGDLESLQTLREVETNHGGEEVFKELERLTQVRVLGLTNVQQGFRNVLYSLINKLQHMEKLYIAAIDEHEVIDLNFIVSELVFQNSQLQKVRLVGRLNGFPNWVAKLQNLVMLSLSHSKLTDDPLGLLKDLPNLLCLSILYCAYEGSCLHFPNGGFPKLEQIIIRRLYKLNSISIENGALPSLKKLKLVSISQLTEVPSGVCSLPKLEVFHAINMSNEFEENFHSNRGQRAQWIIEQVPFVSIVDRFWREENSNF* 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0766 929 Gene3D Ribonuclease Inhibitor 546 903 IPR032675 -
Gso18g0766 929 Gene3D - 424 514 IPR036388 -
Gso18g0766 929 SUPERFAMILY L domain-like 502 893 - -
Gso18g0766 929 PANTHER - 37 893 - -
Gso18g0766 929 Pfam Rx N-terminal domain 12 95 IPR041118 -
Gso18g0766 929 Gene3D - 164 330 IPR027417 -
Gso18g0766 929 Gene3D - 337 423 IPR042197 -
Gso18g0766 929 Coils Coil 35 55 - -
Gso18g0766 929 Pfam NB-ARC domain 183 425 IPR002182 GO:0043531
Gso18g0766 929 PRINTS Disease resistance protein signature 197 212 - -
Gso18g0766 929 PRINTS Disease resistance protein signature 275 289 - -
Gso18g0766 929 PRINTS Disease resistance protein signature 374 388 - -
Gso18g0766 929 PRINTS Disease resistance protein signature 779 795 - -
Gso18g0766 929 PANTHER DISEASE RESISTANCE PROTEIN RP 37 893 IPR044974 GO:0006952
Gso18g0766 929 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 438 IPR027417 -
Gso18g0766 929 Gene3D - 9 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0766 Gso-Chr18 9310447 9314159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0766 123 492 WRKY Transcription Factor Family AT4G12020 24.607 9.57e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0766 K13457 - gmx:100782760 1056.97