Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0760 ATGTCGAATTTGCCCCAATCGCTGTCGATGGGCGCGGCCTTCGGCGGCGGTGGCGCTCCAACGCCGTCTTCCAGTGGCGGCGCCGGAGCACAGGGCTCCGGCGCTGGCAAGGATCGGAAGATGGCGTCCGCGGAGCAGCTCGTGCTCGAACTCAGCAACCCTGAACTCCGTGAAAACGCGCTTCTCGAACTCTCCAAGAAGAGGGAGCTATTTCAAGATCTTGCTCCGTTGCTATGGAATTCTTTTGGTACTATTGCTGCACTTTTGCAGGAAATAGTTTCAATATACCCTGTTCTTTCACCACCAAATCTTACTCCTGCACAATCGAACCGAGTATGCAATGCTCTTGCTCTTCTTCAGTGTGTAGCATCTCACCCTGATACAAGGATGCTATTCCTCAATGCTCATATACCTCTATATCTGTATCCCTTCCTTAATACAACAAGCAAGTCAAGACCATTTGAGTACTTGAGGCTTACCAGCCTTGGTGTCATTGGTGCATTGGTGAAGGTTGATGATACAGAAGTTATAAGTTTCCTTCTTTCAACAGAGATAATTCCTCTATGCTTGCGAACCATGGAAATGGGCAGTGAGCTATCCAAAACAGTTGCAACATTTATTGTTCAAAAAATTCTGTTGGACGATGTGGGCTTGGACTACATTTGTACTACAGCGGAGCGCTTTTTTGCGGTAGGTCGAGTTCTGGGGAACATGGTGGCAGCTCTAGCTGAGCAACCTTCATCTCGTCTATTGAAGCATATCATTCGATGCTATCTTCGCCTGTCAGATAATCCAAGGGCTTGTGATGCATTAAGAAGCTGTCTGCCAGACATGTTAAGAGATGCTACTTTCAGCACTTGCCTTCGTGAAGACCCCACAACTAGGAGGTGGCTACAACAATTGCTTCACAATGTTGGAGTGAATCGGGTTCCTGCACTACAAGCTGGAGGAGGTTTCGATCACATGATTGTGACCTGA 978 0.4796 MSNLPQSLSMGAAFGGGGAPTPSSSGGAGAQGSGAGKDRKMASAEQLVLELSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSTCLREDPTTRRWLQQLLHNVGVNRVPALQAGGGFDHMIVT* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0760 325 Pfam Cell differentiation family, Rcd1-like 47 305 - -
Gso18g0760 325 MobiDBLite consensus disorder prediction 1 38 - -
Gso18g0760 325 PANTHER BNAA05G20110D PROTEIN 1 323 - -
Gso18g0760 325 SUPERFAMILY ARM repeat 49 280 IPR016024 -
Gso18g0760 325 PANTHER UNCHARACTERIZED 1 323 - -
Gso18g0760 325 Gene3D - 36 306 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0760 Gso-Chr18 9229542 9238814 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Gso18g0760 Rcd1 5.8e-130 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0760 K12606 - gmx:100784529 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0760 18 9229542 9238814 Gso8g2646 8 44126708 44134936 GST
Gso18g0760 18 9229542 9238814 Gso14g0179 14 1573756 1578512 PCT
Gso18g0760 18 9229542 9238814 Gso2g2487 2 49327380 49331917 PCT
Gso14g0179 14 1573756 1578512 Gso18g0760 18 9229542 9238814 PCT
Gso2g2487 2 49327380 49331917 Gso18g0760 18 9229542 9238814 PCT