Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0755 ATGTATAAAAAATTAACTAACAACATTGAAGATACCTGCAACAATGATCTCTCTAATGCTGCAGTTACACAGTCTTCTCCAATGATGTCGTTCAATGGGAAACGACTTGCCGTGGATGAGATAGATTTCTTCACAGAGAAGAAGAAGAAAAGTGAAGACGTTGATAATCAATTGGTGCACCACCAAATGGAGCTTCCTATTAATACCAATTTAGATCTCCTTATTACGAAGAGTTCAACCAGCAATAGATCAAATATGGAAGAAGGACCGTCCGAGTCAAGGGATAATACGAGAAATAAGTTTGCAGCTATGTTAGCTGAGTTGCACATCATAAATGCTGAAAATCAACACTTGAGAGAGCTGGTTGACCAGGTGAACAATAAGTACAATGACCTGCACAAGGATCTTACGAAACTTATGCAAAAACAACATAAAAATGAGATTAATGGAGCCATAGAGGAGAAGGATAAGAGAGATGATATGATTATTTCAAGGTCTTTCTTGGATATTGGAATTGCTACGAAGGAAGATCCTTCTCAACAACATTCAGAAGCAAAACTGCAAGAAAGCAAAAACATTACTGAGTTGATGGAGTGCAAGAATAGAGATGTTGTTGAGTGGAATTCTGGCAAGGATAGTGCAAAATCTAGGAGAGATAAGCATGAGAGTTCAGAAACTATGTCAATGATCAAGAAAGCTCGCGTATCAGTTCGAACAAAAACAGATTCATCTATGATTTCAGATGGATGTCAATGGAGAAAGTATGGGCAGAAGATGGCAAAAGGGAATCCATGTCCGCGATCTTATTATCGTTGCTCAATGGGAACTGCTTGTCCAGTTCGGAAGCAAGTACAAAGGAATGCTGAGGATCTAAGTGTGTTGATCACAACATATGAAGGGCAACACAATCATGTACTCCCTCCCACTGCAAAGGCCATTGCATCCACCACATCAGCAGCTGCATCAATGCTACTTTCAGGATCAATGCTAAGCTCAGATGGCCTTATATACCCAAACATATTAGAAAGTGCATCACTTCCGTTTTCTCAGAACTTAGCAACCCTCTCAACTTCAGCTCCATTTCCCACTATAACTTTGGATCTCACTCAAAGTACTACCAATAATTCCTCACAGCTACTACAAGGGGCACCACAGGATAACCAACATATATATAGCCTCCTTTCCCCACTTTTGGCTCAGAAGTTTATGTCATCAGCTACCAACATTTTTTATCAGAATCACCAGACTAAGGTTTCTAGCTTGCATGGGTCTCAGGGAACAGAAACTGCTTCATTTGTGGACACGGTAAATGCAGCTACAGCTGCTATCACTGGAGACCCGAAATTCAGTGCAGCTGTTATGGCTGCCATAACATCTATAATTGGAAGTTCACATCCAAACATTAATGGTACTAGTGGAGATCCAGCATTGCAATAA 1437 0.4022 MYKKLTNNIEDTCNNDLSNAAVTQSSPMMSFNGKRLAVDEIDFFTEKKKKSEDVDNQLVHHQMELPINTNLDLLITKSSTSNRSNMEEGPSESRDNTRNKFAAMLAELHIINAENQHLRELVDQVNNKYNDLHKDLTKLMQKQHKNEINGAIEEKDKRDDMIISRSFLDIGIATKEDPSQQHSEAKLQESKNITELMECKNRDVVEWNSGKDSAKSRRDKHESSETMSMIKKARVSVRTKTDSSMISDGCQWRKYGQKMAKGNPCPRSYYRCSMGTACPVRKQVQRNAEDLSVLITTYEGQHNHVLPPTAKAIASTTSAAASMLLSGSMLSSDGLIYPNILESASLPFSQNLATLSTSAPFPTITLDLTQSTTNNSSQLLQGAPQDNQHIYSLLSPLLAQKFMSSATNIFYQNHQTKVSSLHGSQGTETASFVDTVNAATAAITGDPKFSAAVMAAITSIIGSSHPNINGTSGDPALQ* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0755 478 Coils Coil 108 142 - -
Gso18g0755 478 MobiDBLite consensus disorder prediction 208 228 - -
Gso18g0755 478 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 22 467 IPR044810 GO:0003700
Gso18g0755 478 SUPERFAMILY WRKY DNA-binding domain 239 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso18g0755 478 SMART WRKY_cls 246 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso18g0755 478 Pfam WRKY DNA -binding domain 248 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso18g0755 478 PANTHER WRKY TRANSCRIPTION FACTOR 6-LIKE 22 467 - -
Gso18g0755 478 Gene3D WRKY domain 231 308 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso18g0755 478 ProSiteProfiles WRKY domain profile. 241 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0755 Gso-Chr18 9171333 9175373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0755 40 470 WRKY Transcription Factor Family AT1G62300 41.068 4.27e-90 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso18g0755 WRKY 9.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0755 - - gmx:100779533 907.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0755 18 9171333 9175373 Gso8g2650 8 44155738 44160971 GST
Gso18g0755 18 9171333 9175373 Gso2g2490 2 49348312 49350713 PCT
Gso2g2490 2 49348312 49350713 Gso18g0755 18 9171333 9175373 PCT