Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0752 ATGGGTAGGGGCGGAACCGCCGCGGCGGCGGTGGAGATCGCCGAACCCGGTTCAAGGCCGGTTTTTTCCAAAGAACCGCGTTATAGGGGCGTCAGAAAAAGACCGTGGGGCCGGTTCGCCGCCGAAATCAGAGACCCTTTGAAGAAAGCCAGGGTTTGGCTCGGAACCTTCGACACCGCCGAGGAGGCGGCGCGTGCCTATGACACGGCGGCGAGAACCCTCCGGGGGCCGAAAGCAAAGACCAATTTCCCACTTTCTCCGCCGTTCTACCACCCCGATCCGTTTTCCGATCACCGGTACTTTGACGGCGCTGGCGCCGGCGAAGATTTCCAGGATCACCGGCGACCCACCTCCAGTGGTATGAGCAGCACCGTAGAATCCTTCAGCGGCCCACGCGCCGCCGTGCCGGCGACGGCGCCGGTGATTGTCAACCGGAGATATCCCCGGACGCCGCCCGTCGTTCCCGAGGACTGCCGCAGCGACTGCGACTCGTCGTCATCCGTTGTGGACGACGGAGACGGCGACAACGTGGCGTCGTCGTTCCGGCGAGAACCGTTGCCGTTTGATCTAAACGTGTTACCGTTGGACGATGCTGACGTGGCAACCGATGATCTGTTCTGCACCGTTCTTTGCCTCTGA 639 0.626 MGRGGTAAAAVEIAEPGSRPVFSKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDTAEEAARAYDTAARTLRGPKAKTNFPLSPPFYHPDPFSDHRYFDGAGAGEDFQDHRRPTSSGMSSTVESFSGPRAAVPATAPVIVNRRYPRTPPVVPEDCRSDCDSSSSVVDDGDGDNVASSFRREPLPFDLNVLPLDDADVATDDLFCTVLCL* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0752 212 MobiDBLite consensus disorder prediction 1 24 - -
Gso18g0752 212 Gene3D AP2/ERF domain 27 86 IPR036955 GO:0003700|GO:0006355
Gso18g0752 212 ProSiteProfiles AP2/ERF domain profile. 27 84 IPR001471 GO:0003700|GO:0006355
Gso18g0752 212 SMART rav1_2 27 90 IPR001471 GO:0003700|GO:0006355
Gso18g0752 212 MobiDBLite consensus disorder prediction 152 177 - -
Gso18g0752 212 Pfam AP2 domain 26 76 IPR001471 GO:0003700|GO:0006355
Gso18g0752 212 SUPERFAMILY DNA-binding domain 27 86 IPR016177 GO:0003677
Gso18g0752 212 CDD AP2 26 86 IPR001471 GO:0003700|GO:0006355
Gso18g0752 212 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 194 - -
Gso18g0752 212 PANTHER ETHYLENE RESPONSE FACTOR 1 194 - -
Gso18g0752 212 MobiDBLite consensus disorder prediction 106 130 - -
Gso18g0752 212 PRINTS Ethylene responsive element binding protein signature 28 39 IPR001471 GO:0003700|GO:0006355
Gso18g0752 212 PRINTS Ethylene responsive element binding protein signature 50 66 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0752 Gso-Chr18 9100391 9101678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0752 2 212 AP2-EREBP Transcription Factor Family AT1G50640 57.642 8.56e-54 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gso18g0752 AP2 2.9e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0752 K09286 - gmx:100782025 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0752 18 9100391 9101678 Gso8g2654 8 44201279 44202616 GST
Gso18g0752 18 9100391 9101678 Gso14g0168 14 1482932 1484428 PCT
Gso18g0752 18 9100391 9101678 Gso2g2497 2 49404707 49406157 PCT
Gso14g0168 14 1482932 1484428 Gso18g0752 18 9100391 9101678 PCT
Gso2g2497 2 49404707 49406157 Gso18g0752 18 9100391 9101678 PCT