Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0737 ATGCTGGCGCACTATAATGGTTATTTAATAACATTGGGCCAATGCTGTATGTTCAAATCAAGGGTAATGGCATCTTCTTCAGACTCATGGATGAAGGAATATAATGAAGCTGTGAAACTTGCTGATGATATCACTGGCATGATTTCTGAACGTAGTTCATTCCCTGCATCTGGACCAGAAACCCAGCGACATGCATCTGCTATAAGAAGGAAGATCACGATATTGGGGACCAGACTTGATAGCTTGCAATCTCTTTTGTCAAAGGTCCCTGCAAAAACTGAGAAGGAGATGAATCGTCGCAAGGACATGCTTTTGAATTTGAGGACAAAAGTTAACCAAATGGCTTCAACATTGAACATGTCAAACTTTGCAAATAGGGATAGTTTGTTTGGGCCAGAAATAAAATCAGATGCAATGAGCAGAACTGTTGGCCTGGACAACAGTGGACTAGTTGGTCTTCAACGGCAAATTATGAAAGAGCAAGACGATGGCCTTGAGAAATTGGAGGAGACTGTAATCAGTACTAAACATATTGCGTTGGCTGTGAATGAAGAGCTGAATCTACATACCAGACTCATTGATGACTTGGACCAACATGTAGATGTTACAGATTCTCGGCTGAGGAGAGTGCAGAAGAACTTGGCAGTGTTAAACAAACGCACCAAGGGTGGTTGCTCCTGCTTGTGCATGCTTTTATCAGTCATTGGTATAGTGGGTTTGGTTGTTGTCATATGGCTGCTGGTCAAATATTTGTAA 756 0.418 MLAHYNGYLITLGQCCMFKSRVMASSSDSWMKEYNEAVKLADDITGMISERSSFPASGPETQRHASAIRRKITILGTRLDSLQSLLSKVPAKTEKEMNRRKDMLLNLRTKVNQMASTLNMSNFANRDSLFGPEIKSDAMSRTVGLDNSGLVGLQRQIMKEQDDGLEKLEETVISTKHIALAVNEELNLHTRLIDDLDQHVDVTDSRLRRVQKNLAVLNKRTKGGCSCLCMLLSVIGIVGLVVVIWLLVKYL* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0737 251 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 155 217 IPR000727 -
Gso18g0737 251 SUPERFAMILY SNARE fusion complex 146 216 - -
Gso18g0737 251 Gene3D - 157 219 - -
Gso18g0737 251 CDD SNARE_Qc 158 215 - -
Gso18g0737 251 Pfam SNARE domain 192 243 IPR000727 -
Gso18g0737 251 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 23 246 - -
Gso18g0737 251 PANTHER SYNTAXIN 23 246 IPR045242 -
Gso18g0737 251 SMART tSNARE_6 150 217 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0737 Gso-Chr18 8782237 8786900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0737 23 251 SNARE and Associated Proteins AT1G16240 72.414 4.56e-123 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0737 K08503 - gmx:100794038 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0737 18 8782237 8786900 Gso8g2668 8 44361169 44365680 GST
Gso18g0737 18 8782237 8786900 Gso14g0151 14 1312690 1315147 PCT
Gso14g0151 14 1312690 1315147 Gso18g0737 18 8782237 8786900 PCT