Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0729 ATGGCAGAAACTGCAGTGTCCTTGGCTGGTAAGCATGCCCTTCCAAAAATATTGGAAGCTGTCAAAATGGTGAGAGATCTCCCAAAAGAAGTTAGAGACATTACAGATGAACTTGAAAGCTTTCAAGATTTCATTAATGATGCTGATAAAGTGGCTGAAGCTGAACAAGATGATGGAAGGCGTCATAGAATAAAAGAAAGGGTGATGCGGCTGAGAGAAGCAGCTTTTCGCATGGAAGATGTCATCGATGAATATAACATCTGTGAGGATAAGCAACCTGATGATCCTCGATGTGCAGATTTACTATGTGAGGCTGTTGCCTTCATCAAAACTCAAATCCTTCTCCTTCAAAGTGCATATAAGATTCAGGATGTTAAATCGCTTGTTCGTGCTGAAAGAGATGGTTTCCAAACCCATTTTCCTTTAGAACCAAGACTAACAAGTTCTAGAGGAAATCAAGATGTCACCTGGCAGAAACTTCGAATGGATCCTCTCTTTATCGAGGAAGATGATGTTGTGGGGCTTGATGGCCCTAGAGATACACTGAAAAATTGGTTGACAAAGGGAAGAGAAAAACGCACTGTCATCTCTGTGGTGGGAATTCCTGGGGTGGGAAAAACCACTATTGCCAAGCAAGTTTATGACCAGGTGCGTAACAATTTCGAGTGCCATGCATTGATCACAGTGTCTCAATCCTACTCTGCAGAAGGACTGCTGAGGCGTTTGTTGGATGAGCTTTGCAAACTGAAAAAGGAGGACCCTCCCAAGGATGTTTCTAACATGGAGTCGTTGACCGAAGAAGTCAGAAACCGCTTGCGCAACAAGAGGTATGTTGTCTTGTTTGATGACGTATGGAATGAAACATTTTGGGATCACATTGAATCTGCTGTAATTGATAATAAAAATGGAAGTAGGATTTTAATCACAACCAGGGATGAGAAGGTTGCGGGATATTGTAAGAAATCTTCTTTTGTTGAGGTGCTTAAGCTAGAAGAGCCATTAACTGAAGAAGAATCATTGAAATTGTTTTCTAAGAAGGCATTTCAGTATAGTTCCGATGGAGATTGTCCAGAAGAACTTAAAGATATATCTCTAGAAATTGTTAGAAAGTGTAAAGGTTTACCTCTAGCAATAGTGGCCATTGGTGGTCTTTTGTCTCAAAAAGATGAAAGTGCACCTGAATGGGGACAATTTAGTCGAGATCAATGTTTAGACTTGGAGAGGAATTCTGAGTTAAATAGTATAACAAAAATTTTAGGTTTAAGTTATGATGATTTGCCGATCAATCTCAGATCATGTTTATTGTATTTCGGAATGTATCCGGAGGACTATGAAATTAAATCTGATAGATTGATTAGACAGTGGATAGCTGAAGGGTTTGTCAAACATGAAACCGGAAAAACATTGGAAGAAGTTGCCCAACAATATTTATCAGGGTTGGTCCGTAGAAGTTTGGTGCAAGTATCCTCATTTAGAATTGATGGCAAAGTTAAAAGGTGTCGTGTTCATGACTTAATACACGACATGATCCTTAGAAAAGTGAAGGATACAGGGTTTTGTCAGTATATTGATGGGCGTGATCAATCGGTATCAAGTAAGATTGTTCGACGCCTGGCAATTGCAACCGATGATTTTAGTGGAAGTATAGGAAGCTCACCCATTCGGTCAATTTTTATTAGCACAGGAGAAGATGAAGAAGTATCTGAACACTTAGTAAACAAAATCCCTACAAATTACATGCTATTGAAGGTACTTGATTTTGAAGGTTCTGGTTTACGTTATGTTCCTGAAAATTTGGGGAATTTATGCCACTTGAAGTATTTAAGCTTCCGGTATACAGGGATAAAAAGTCTACCAAAATCCATTGGTAAGCTCCAGAATTTGGAGACCTTGGATATTAGAGACACAGGTGTGTCTGAGATGCCAGAGGAGATTAGTAAGCTTAAAAAGCTACGTCGTCTTCAGGCTTCTAATATGATCATGGGTTCAATATGGAGGAATATTGGAGGCATGACATCCCTACAAGAGATACCTCCAGTGAAAATAGATGATGATGGAGTGGTCATTGGAGAGGTGGGAAAGCTAAAGCAGTTAAGGGAACTGTTGGTGCTAGATTTTAGGGGAAAACACGAAAAGACTTTGTGTTCCTTAATAAATGAGAAGCCACTCTTGGAGAAACTAGTTATTGAAACAGCTGATGAGAGTGAAGTAATTGAGTTGTACATTACGTCACCTATGTCTACACTTAGGAAGCTTGTCCTATTTGGGAAGTTAACAAGGTTGCCAAATTGGATTTCACAGTTCCCAAATCTTGTGCAACTGTCTTTGAACGGCTCCAGGTTGACTAATAATGCATTGAAATCACTAAAAAATATGCCAAGGTTGTTGTTCCTCGATTTAAGTGACAATGCTTATGAAGGTGAAACTTTGCATTTTCAATGTGGAGGGTTTCAGAAACTAAAGCGACTGTACCTCGGAAGTTTGGATCAATTGAAGTGCATCCTTATCGACAGAGGAGCACTGTGTTCTGTGGAAGAAATTGTTTTAGAAGACCTCTCCCAACTCAAAACAGTTCCCTCTGGAATTCAACACTTGGAGAAGCTTAAAGATCTCATTATCGACGTCATGCCAACTGAATTTGAGCAGCGCATAGCTCCTGATGGAGGAGAAGACCACTGGATCATCCAAGATGTGCCCCATGTACTTATCTGTAGATAG 2718 0.3988 MAETAVSLAGKHALPKILEAVKMVRDLPKEVRDITDELESFQDFINDADKVAEAEQDDGRRHRIKERVMRLREAAFRMEDVIDEYNICEDKQPDDPRCADLLCEAVAFIKTQILLLQSAYKIQDVKSLVRAERDGFQTHFPLEPRLTSSRGNQDVTWQKLRMDPLFIEEDDVVGLDGPRDTLKNWLTKGREKRTVISVVGIPGVGKTTIAKQVYDQVRNNFECHALITVSQSYSAEGLLRRLLDELCKLKKEDPPKDVSNMESLTEEVRNRLRNKRYVVLFDDVWNETFWDHIESAVIDNKNGSRILITTRDEKVAGYCKKSSFVEVLKLEEPLTEEESLKLFSKKAFQYSSDGDCPEELKDISLEIVRKCKGLPLAIVAIGGLLSQKDESAPEWGQFSRDQCLDLERNSELNSITKILGLSYDDLPINLRSCLLYFGMYPEDYEIKSDRLIRQWIAEGFVKHETGKTLEEVAQQYLSGLVRRSLVQVSSFRIDGKVKRCRVHDLIHDMILRKVKDTGFCQYIDGRDQSVSSKIVRRLAIATDDFSGSIGSSPIRSIFISTGEDEEVSEHLVNKIPTNYMLLKVLDFEGSGLRYVPENLGNLCHLKYLSFRYTGIKSLPKSIGKLQNLETLDIRDTGVSEMPEEISKLKKLRRLQASNMIMGSIWRNIGGMTSLQEIPPVKIDDDGVVIGEVGKLKQLRELLVLDFRGKHEKTLCSLINEKPLLEKLVIETADESEVIELYITSPMSTLRKLVLFGKLTRLPNWISQFPNLVQLSLNGSRLTNNALKSLKNMPRLLFLDLSDNAYEGETLHFQCGGFQKLKRLYLGSLDQLKCILIDRGALCSVEEIVLEDLSQLKTVPSGIQHLEKLKDLIIDVMPTEFEQRIAPDGGEDHWIIQDVPHVLICR* 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0729 905 Gene3D Ribonuclease Inhibitor 559 884 IPR032675 -
Gso18g0729 905 SUPERFAMILY L domain-like 501 876 - -
Gso18g0729 905 Gene3D - 161 327 IPR027417 -
Gso18g0729 905 Gene3D - 423 514 IPR036388 -
Gso18g0729 905 CDD RX-CC_like 21 127 IPR038005 -
Gso18g0729 905 Gene3D - 333 422 IPR042197 -
Gso18g0729 905 Gene3D - 5 115 - -
Gso18g0729 905 PRINTS Disease resistance protein signature 195 210 - -
Gso18g0729 905 PRINTS Disease resistance protein signature 271 285 - -
Gso18g0729 905 PRINTS Disease resistance protein signature 371 385 - -
Gso18g0729 905 PRINTS Disease resistance protein signature 790 806 - -
Gso18g0729 905 Pfam Rx N-terminal domain 11 96 IPR041118 -
Gso18g0729 905 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 437 IPR027417 -
Gso18g0729 905 PANTHER DISEASE RESISTANCE PROTEIN RP 26 853 IPR044974 GO:0006952
Gso18g0729 905 PANTHER - 26 853 - -
Gso18g0729 905 Pfam NB-ARC domain 180 425 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0729 Gso-Chr18 8625220 8628846 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0729 196 679 WRKY Transcription Factor Family AT5G45050 23.783 1.13e-16 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0729 K13457 - gmx:100786451 1758.42