Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0725 ATGGCAGAAACTGCAGTGTCCTTGGCAGGTCAGCAGGCGCTTCCAAAAATATTGGAAGCTGTTAAAATGTTGAGAGATCTCCCAAAAGAAGTTAGAGACATTACAGATGAACTTGAAAACTTTCAAGATTTCATCAATGATGCTGATAAAGTGGCTGAAGCTGAAGAAGATGATGGAAGGCGTCATAGAATAAAAGAAAGGGTGATGCGGCTGAGAGAAGCAGCTTTTCGCATGGAAGATGTCATCGATGAATATGAATATAACATCTCCTGTGAGGATAAGCAACCTGATGATCCTCGATGGGCAGCTTTACTAGGTGAGGCTGTTGCCTTCATCAAAACTCAAATCCTTCTCCTTCAAAGTGCGTATAAGATTCAGGATGTTAAATCCCTTGTTCGTGCTGAAAGAGATGGTTTCCAAAGCCATTTTCCTTTAGAGCAAAGACAAACCAGTTCTAGAGGAAATCAAGATATCACATGGCAGAAACTTAGAAGGGATCCTCTCTTTATTGAGGAAGATGAGGTTGTGGGGCTTGATGGCCCTAGAGGTATATTGAAAAATTGGTTGACAAAGGGAAGAGAAAAACGCACTGTCATCTCTGTGGTGGGAATTGCAGGGGTGGGAAAAACCACTCTTGCCAAGCAAGTTTATGACCAGGTGCGTAACAATTTCGAGTGCCATGCGTTGATCACAGTTTCTCAATCCTTCTCTGCTGAAGGATTGCTGAGGCATATGTTGAATGAGCTTTGCAAAGAAAAAAAGGAGGACCCTCCCAAGGATGTTTCTACCATCGAATCGTTGACAGAAGAAGTCAGAAACCGCTTGCGCAACAAGAGGTATGTTGTCTTGTTTGATGACGTATGGAATGAAAAATTTTGGGATCACATTGAATCTGCTGTAATTGATAATAAAAATGGAAGTAGGATATTAATCACAACCAGGGATGAGAAGGTTGCAGAATATTGTAGGAAATCATCATTTGTTGAGGTGCATAAGCTAGAAAAACCTTTAACTGAAGAAGAATCTTTGAAATTGTTCTGTAAGAAGGCATTTCAGTATAGTTCCGATGGAGATTGTCCAGAAGAACTTAAAGATATATCTCTTGAAATTGTTAGAAAGTGTAAAGGTTTACCTCTAGCAATAGTGGCCATTGGTGGTCTTTTGTCTCAAAAAGATGAAAGTGCACCTGAATGGGGACAGTTTAGTCGAGATCTAAGTTTAGACTTGGAGAGGAATTCTGAGTTAAATAGTATAACAAAAATTTTAGGTTTAAGTTATGATGATTTGCCGATCAATCTCAGATCATGTTTACTGAATTTCGGAATGTATCCGGAGGACTATGAAGTTACATCTGATAGATTGATTAGACAGTGGATAGCTGAAGGGTTTGTCAAACATGAAACCGGAAAAACATTGGAAGAAGTTGGGCAACAATATTTATCAGGGTTGGTCCGTAGAAGTTTGGTGCAAGTATCCTCATTTAGAATTGATGGCAAAGTTAAAAGGTGTCATGTTCATGACTTAATACACGACATGATCCTTAGAAAAGTCAAGGATACAGGATTTTGTCAGTATATTGACGGGCCTGATCAATCTGTATCAAGTAAGATTGTTCGACGCCTGACAATTGCAACCGATGATTTTAGTGGAAGTATAGGAAGCTCACCCATTCGGTCAATTCTTATCATGACAGGAAAGTATGAAAAATTATCTCAAGACTTGGTAAACAAATTCCCTACAAATTACATGGTACTGAAGGTACTTGATTTTGAAGGTTCTGGTTTACGTTATGTTCCTGAAAATTTGGGGAATTTATGCTACTTGAAGTATTTAAGCTTCCGGTATACATGGATAACAAGTCTACCAAAATCCATTGGCAAGCTCCAGAATTTGGAGACCTTGGATATAAGAGACACAAGGGTGTCTAAGATGCCAGAGGAGATTCGTAAGCTTACTAAGCTACGTCAGCTTCTGTCTTATTATACGGGTTTAATTCAATGGAAGGATATTGGAGGCATGACATCCCTACAAGAGATACCTCCAGTGATTATAGATGATGATGGAGTGGTCATTGGAGAGGTAGGAAAGCTAAAGCAGTTAAGGGAACTGTTGGTGGTAAAATTTAGGGGAAAACACGAAAAGACTTTGTGTTCCGTAATAAATGAGATGCCACTCTTGGAGAAACTACATATTTATACAGCTGATTGGAGTGAAGTAATTGACTTGTACATTACGTCACCTATGTCTACACTTAGGCAGCTTGTCCTATGGGGGACGTTAACAAGGTTGCCAAATTGGATTTTACAGTTCCCAAATCTTGTGCAACTGTCTTTGGTGGGCTCCAAGTTGACTAATGATGCATTCAATTCACTAAAAAATATGCCAAGGTTGTTGTTCCTGGATTTAAGTTACAATGCTTATGAAGGTGAAACTTTGAATTTTCAAGGTGGAGGGTTTCAGAAACTAAAGCGACTGCAACTCAGATATTTGGATCAATTGAAGTGCATCCTTATCGACAGAGGAGCACTGTGTTCTGTGGAAGAAATTGTTTTACAAGACCTCTCCCAACTCAAAACAGTTCCCTCGGGAATTCAACACTTGGAGAAGCTTAAAGATCTCTATATCAACTACATGCCAACTGAATTGGTGCAGCGCATTGCTCCTGATGGAGGAGAAGACCACTGGATCATCCAAGATTTGCCCCATGTACGTATTTGGAGCAGGGGTGCTGAAGAACCTTCGCATATATTCGGCAGAAGTCATCACTAA 2769 0.398 MAETAVSLAGQQALPKILEAVKMLRDLPKEVRDITDELENFQDFINDADKVAEAEEDDGRRHRIKERVMRLREAAFRMEDVIDEYEYNISCEDKQPDDPRWAALLGEAVAFIKTQILLLQSAYKIQDVKSLVRAERDGFQSHFPLEQRQTSSRGNQDITWQKLRRDPLFIEEDEVVGLDGPRGILKNWLTKGREKRTVISVVGIAGVGKTTLAKQVYDQVRNNFECHALITVSQSFSAEGLLRHMLNELCKEKKEDPPKDVSTIESLTEEVRNRLRNKRYVVLFDDVWNEKFWDHIESAVIDNKNGSRILITTRDEKVAEYCRKSSFVEVHKLEKPLTEEESLKLFCKKAFQYSSDGDCPEELKDISLEIVRKCKGLPLAIVAIGGLLSQKDESAPEWGQFSRDLSLDLERNSELNSITKILGLSYDDLPINLRSCLLNFGMYPEDYEVTSDRLIRQWIAEGFVKHETGKTLEEVGQQYLSGLVRRSLVQVSSFRIDGKVKRCHVHDLIHDMILRKVKDTGFCQYIDGPDQSVSSKIVRRLTIATDDFSGSIGSSPIRSILIMTGKYEKLSQDLVNKFPTNYMVLKVLDFEGSGLRYVPENLGNLCYLKYLSFRYTWITSLPKSIGKLQNLETLDIRDTRVSKMPEEIRKLTKLRQLLSYYTGLIQWKDIGGMTSLQEIPPVIIDDDGVVIGEVGKLKQLRELLVVKFRGKHEKTLCSVINEMPLLEKLHIYTADWSEVIDLYITSPMSTLRQLVLWGTLTRLPNWILQFPNLVQLSLVGSKLTNDAFNSLKNMPRLLFLDLSYNAYEGETLNFQGGGFQKLKRLQLRYLDQLKCILIDRGALCSVEEIVLQDLSQLKTVPSGIQHLEKLKDLYINYMPTELVQRIAPDGGEDHWIIQDLPHVRIWSRGAEEPSHIFGRSHH* 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0725 922 Pfam Rx N-terminal domain 6 96 IPR041118 -
Gso18g0725 922 Pfam NB-ARC domain 185 428 IPR002182 GO:0043531
Gso18g0725 922 Gene3D - 426 517 IPR036388 -
Gso18g0725 922 PANTHER - 27 855 - -
Gso18g0725 922 Gene3D - 4 117 - -
Gso18g0725 922 SUPERFAMILY L domain-like 505 882 - -
Gso18g0725 922 Gene3D - 168 330 IPR027417 -
Gso18g0725 922 CDD RX-CC_like 2 130 IPR038005 -
Gso18g0725 922 Gene3D Ribonuclease Inhibitor 557 890 IPR032675 -
Gso18g0725 922 PRINTS Disease resistance protein signature 198 213 - -
Gso18g0725 922 PRINTS Disease resistance protein signature 274 288 - -
Gso18g0725 922 PRINTS Disease resistance protein signature 374 388 - -
Gso18g0725 922 PRINTS Disease resistance protein signature 626 642 - -
Gso18g0725 922 Gene3D - 336 425 IPR042197 -
Gso18g0725 922 PANTHER DISEASE RESISTANCE PROTEIN RP 27 855 IPR044974 GO:0006952
Gso18g0725 922 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 438 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0725 Gso-Chr18 8465955 8469767 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0725 198 512 WRKY Transcription Factor Family AT5G45050 26.266 1.69e-14 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0725 K13457 - gmx:121174068 1733.38