Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0722 ATGGCAGAAACTGCAGTGTCCTTGGCTGGTCAGCATGCGCTTCCAAAAATATTGGAAGCTGTCAAAATGCTGAGAGATCTCCCAAAAGAAGTTAGAGACATTACAGATGAACTTGAAAGCTTTCAAGAGTTCATCAATGATGCTGATAAAGTGGCTGAAGCTGAACAAGATGATGGAAGGCGTCATAGAATAAAAGAAAGGGTGATGCGGCTGAGAGAAGCAGCTTTTCGCATGGAAGATGTCATCGATGAATATAACATCTCCTGTGAGGATAAGCAACCTGATGATCCTCGATGTGCAGCTTTACTATGTGAGGCTGTTGCCTTCATCAAAACTCAAATCCTTCTCCTTCAAAGTGCGTATAAGATTCAGGATGTTAAATCCCTTGTTCGTGCTGAAAGAGATGGTTTCCAAAGCCATTTTCCTTTAGAGCAAAGACCAACCAGTTCTAGAGGAAATCAAGATATCACATGGCAGAAACTTAGAAGGGATCCTCTCTTTATTGAGGAAGATGAGGTTGTGGGGCTTGATGGCCCTAGAGGTATATTGAAAAATTGGTTGACAAAGGGAAGAGAAAAACGCACTGTCATCTCTGTGGTGGGAATTGCAGGGGTGGGAAAAACCACTCTTGCCAAGCAAGTTTATGACCAGGTGCGTAACAATTTCGAGTGCCATGCGTTGATCACAGTTTCTCAATCCTTCTCTGCTGAAGGATTGCTGAGGCATATGTTGAATGAGCTTTGCAAAGAAAAAAAGGAGGACCCTCCCAAGGATGTTTCTACCATCGAGTTGTTGACAGAAGAAGTCAGAAACCGCTTGCGCAACAAGAGGTATGTTGTCTTGTTTGATGACGTATGGAATGGAAAATTTTGGGATCACATTGAATCTGCTGTAATTGATAATAAAAATGGAAGTAGGATATTAATCACAACCAGGGATGAGAAGGTTGCAGAATATTGTAGGAAATCATCATTTGTTGAGGTGCTTAAGCTAGAAGAACCTTTAACTGAAAAAGAATCTTTGAAATTGTTCTGTAAGAAGGCATTTCAGTATAGTTCCGATGGAGATTGTCCAGAAGAACTTAAAGATATATCTCTTCAAATTGTTAGAAAGTGTAAAGGTTTACCTCTAGCAATAGTGGCCATTGGTGGTCTTTTGTCTCAAAAAGATGAAAGTGCACCTGAATGGGGACAGTTTAGTCGAGATCTAAGTTTAGACTTGGAGAGGAATTCTGAGTTAAATAGTATAACAAAAATTTTAGGTTTAAGTTATGATGATTTGCCGATCAATCTCAGGTCATGTTTATTGTATTTCGGAATGTATCCAGAGGACTATGAAGTTCAATCTGATAGATTGATTAGACAGTGGATAGCTGAAGGGTTTGTCAAACATGAAACCGGAAAATCTTTGGAAGAAGTTGGGCAACAATATTTATCAGGGTTGGTCCGTAGAAGTTTGGTGCAAGTATCCTCACTTAGAATTGATGGCAAAGTTAAAAGGTGTCGTGTTCATGACTTAATACACGACATGATCCTTAGAAAAGTCAAGGATACAGGATTTTGTCAGTATATTGACGGGCCTGATCAATCTGTATCTAGTAAGATTGTTCGACGCCTGACAATTGCAACCCATGATTTTAGTGGAAGTATAGGAAGCTCACCCATGCGGTCAATTCTTATCATGACAGGAAAGTATGAAAAATTATCTCAAGACTTGGTAAACAAATTCCCTACAAATTACATGCTACTGAAGGTACTTGATTTTGAAGGTTCTCGTTTACGTTTACGTTATGTTCCTGAAAATTTGGGGAATTTATGCCACTTGAAGTATTTAAGCTTCCGGTATACATGGATAGCAAGTCTACCAAAATCCATTGGTAAGCTCCAGAATTTGGAGACCTTGGATATAAGAGGCACACATGTGTCTGAGATGCCAAAGGAGATTACGAAGCTTACTAAGCTACGTCATCTTCTGAGTGAGTATATATCTTTAATTCAATGGAAGGATATTGGAGGCATGACATCCCTACAAGAGATACCTCCAGTGATTATAGATGATGATGGAGTGGTCATTAGAGAGGTAGGAAAGCTAAAGCAGTTAAGGGAACTGTTGGTGGTAAAATTTAGGGGAAAACACGAAAAGACTTTGTGTTCCGTAATAAATGAGATGCCACTCTTGGAGAAACTAGATATTTATACAGCTGATGAGAGTGAAGTAATTGACTTGTACATTACGTCACCTATGTCTACACTTAGGAAGCTTGTCCTATGGGGGACGTTAACAAGGTTTCCAAATTGGATTTCACAGTTCCCAAATCTTATGCAACTGTATTTGAGCGGCTCCAGGTTGACTAATGATGCATTGAAATCACTAAAAAATATGCCAAGGTTGTTGTTCCTCGGTTTAAGTTACAATGCTTATGAAGGTGAAACTTTGCATTTTCATTGTGGAGGGTTTCAGAAACTAAAGCAACTGTCCCTCGGAAGTTTGGATCAATTGAAGTGCATCCTTATCGACAGAGGAGCACTGTGTTCTGTGGAAGAAATTGTTTTACGAGACCTCTCCCAACTCAAAGCAGTTCCCTCTGGAATTCAACACTTGGAGAAGCTTAAAGATCTCTATATCGACGACATGCCAACTGAATTTGAGCAGCGCATTGCTCCTGATGGAGGAGAAGACCACTGGATCATCCAAGATGTGCCCCATGTACGTATTTGGAGTGAGGATGCTGCAAAACCTTCTTATATATTCGGCAGAAGTCATCACTAA 2769 0.3994 MAETAVSLAGQHALPKILEAVKMLRDLPKEVRDITDELESFQEFINDADKVAEAEQDDGRRHRIKERVMRLREAAFRMEDVIDEYNISCEDKQPDDPRCAALLCEAVAFIKTQILLLQSAYKIQDVKSLVRAERDGFQSHFPLEQRPTSSRGNQDITWQKLRRDPLFIEEDEVVGLDGPRGILKNWLTKGREKRTVISVVGIAGVGKTTLAKQVYDQVRNNFECHALITVSQSFSAEGLLRHMLNELCKEKKEDPPKDVSTIELLTEEVRNRLRNKRYVVLFDDVWNGKFWDHIESAVIDNKNGSRILITTRDEKVAEYCRKSSFVEVLKLEEPLTEKESLKLFCKKAFQYSSDGDCPEELKDISLQIVRKCKGLPLAIVAIGGLLSQKDESAPEWGQFSRDLSLDLERNSELNSITKILGLSYDDLPINLRSCLLYFGMYPEDYEVQSDRLIRQWIAEGFVKHETGKSLEEVGQQYLSGLVRRSLVQVSSLRIDGKVKRCRVHDLIHDMILRKVKDTGFCQYIDGPDQSVSSKIVRRLTIATHDFSGSIGSSPMRSILIMTGKYEKLSQDLVNKFPTNYMLLKVLDFEGSRLRLRYVPENLGNLCHLKYLSFRYTWIASLPKSIGKLQNLETLDIRGTHVSEMPKEITKLTKLRHLLSEYISLIQWKDIGGMTSLQEIPPVIIDDDGVVIREVGKLKQLRELLVVKFRGKHEKTLCSVINEMPLLEKLDIYTADESEVIDLYITSPMSTLRKLVLWGTLTRFPNWISQFPNLMQLYLSGSRLTNDALKSLKNMPRLLFLGLSYNAYEGETLHFHCGGFQKLKQLSLGSLDQLKCILIDRGALCSVEEIVLRDLSQLKAVPSGIQHLEKLKDLYIDDMPTEFEQRIAPDGGEDHWIIQDVPHVRIWSEDAAKPSYIFGRSHH* 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0722 922 Gene3D Ribonuclease Inhibitor 554 888 IPR032675 -
Gso18g0722 922 Pfam Rx N-terminal domain 6 93 IPR041118 -
Gso18g0722 922 Gene3D - 424 515 IPR036388 -
Gso18g0722 922 Gene3D - 166 328 IPR027417 -
Gso18g0722 922 Gene3D - 334 423 IPR042197 -
Gso18g0722 922 PRINTS Disease resistance protein signature 196 211 - -
Gso18g0722 922 PRINTS Disease resistance protein signature 272 286 - -
Gso18g0722 922 PRINTS Disease resistance protein signature 372 386 - -
Gso18g0722 922 PRINTS Disease resistance protein signature 626 642 - -
Gso18g0722 922 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 438 IPR027417 -
Gso18g0722 922 Gene3D - 5 115 - -
Gso18g0722 922 PANTHER DISEASE RESISTANCE PROTEIN RP 26 882 IPR044974 GO:0006952
Gso18g0722 922 CDD RX-CC_like 2 128 IPR038005 -
Gso18g0722 922 Pfam NB-ARC domain 183 426 IPR002182 GO:0043531
Gso18g0722 922 SUPERFAMILY L domain-like 502 882 - -
Gso18g0722 922 PANTHER - 26 882 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0722 Gso-Chr18 8389071 8392871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0722 197 510 WRKY Transcription Factor Family AT5G45050 27.389 8.27e-16 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0722 K13457 - gmx:100799057 1833.15