Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0708 ATGGCAGAAACTGCAGTGTCCTTGGCTGGTCAGCATGCGCTTCCAAAAATATTGGAAGCTGTCAAAATGCTGAGAGATCTCCCAAAGGAAGTTAGAGACATTACAGATGAACTTGAAAGCTTTCAAGATTTCATCAATGATGCTGATAAAGTGGCTGAAGCAGAAGAAGATGATGGAAGGCGTCATAGAATAAAAGAAAGGGTGGTGCGGCTGAGAGAAGCAGCTTTTCGCATGGAAGATGTCATCGATGAATATAACATCTCCTGTGAGGATAAGCAACCTGATGATCCTCGATGTGCAGCTTTACTATGTGAGGCTGTTGCCTTCATCAAAACTCAAATCCTTCTCCTTCAAAGTGCATATAAGATTCAGGATGTAAAATCCCTTGTTCGTGCTGAAAGAGATGCTTTCCAAAGCCATTTTCCATTAGAGCAAAGACCAACCAGTTCTAGAGGAAATCAAGATGTCACCTGGCAGAAACTTAGAAGGGATCCTCTCTTTATTGAGGAAGATGAGGTTGTGGGGCTTGATGGCCCTAGAGGTATATTGAAAAATTGGTTGACAAAGGGAAGAGAAAAACGCACTGTCATCTCTGTGGTGGGAATTGCAGGGGTGGGAAAAACCACTCTTGCCAAGCAAGTTTATGACCAGGTGCGTAACAATTTCGAGTGCCATGCGTTGATCACAGTTTCTCAATCCTTCTCTGCTGAAGGATTGCTGAGGCATATGTTGAATGAGCTTTGCAAAGAAAAAAAGGAGGACCCTCCCAAGGATGTTTCTACCATCGAGTGGTTGACAGAAGAAGTCAGAAACCGCTTGCGCAACAAGAGGTATGTTGTCTTGTTTGATGACGTATGGAATGGAAAATTTTGGGATCACATTGAATCTGCTGTAATTGATAATAAAAATGGAAGTAGGATATTAATCACAACCAGGGATGAGAAGGTTGCAGAATATTGTAGGAAATCATCATTTGTTGAGGTGCATAAGCTAGAAAAACCGTTAACTGAAGAAGAATCTTTGAAATTGTTCTGTAAGAAGGCATTTCAGTATAGTTCCGATGGAGATTGTCCAGAAGAACTTAAAGATATATCTCTAGAAATTGTTAGAAAGTGTAAAGGTTTACCTCTAGCAATAGTGGCCATTGGTGGTCTTTTGTCTCAAAAAGATGAAAGTGCACCGGAATGGGGACAGTTTAGTCGAGATCTAAGTTTAGACTTGGAGAGGAATTCTGAGTTAAATAGTATAACAAAAATTTTAGGTTTAAGTTATGATGATTTGCCGATCAATCTCAGATCATGTTTATTGTATTTCGGAATGTATCCGGAGGACTATGAAGTTGAATCTGATAGATTGATTAGACAGTGGATAGCTGAAGGGTTTGTCAAACATGAAACCGGAAAAACATTGGAAGAAGTTGGGCAACAATATTTATCTGGGTTGGTCCGTAGAAGTTTGGTGCAAGTATCCTCATTTGGACTTGATGGAAACGTTGAATGGTGTCGTGTTCATGACTTAATACACGACATGATCCTTAGAAAAGTCAAGGATACAGGGTTTTGTCAGTATATTGACGGGCGTGATCAATCTGTATCAAGTAAGATTGTTCGACGCCTGACAATTGCAACCCATGATTTTAGTGGAAGTATAGGAAGCTCACCCATTCGGTCAATTCTTATCATGACAGGAAAAGATGAAAACTTATCTCAAGACTTGGTAAACAAATTCCCTACAAATTACATGCTACTGAAGGTACTTGATTTTGAAGGTTCTGCTTTTAGTTATGTTCCTGAAAATTTGGGGAATTTATGCCACTTGAAGTATTTAAGCTTCCGGTATACATGGATAACAAGTCTACCAAAATCCATTGGTAAGCTCCAGAATTTGGAGACCTTGGATATAAGAGACACAGATGTGTCTGAGATGCCAGAGGAGATTAGTAAGCTTAAAAAGCTACGTCATCTTCTGGCTTATTATAGGTGTTCAATTCAATGGAAGGATATTGGAGGCATGACATCCCTACAAGAGATACCTCCAGTGATTATAGATGATGATGGAGTGGTCATTAGAGAGGTTGGAAAGCTAAAGCAGTTAAGGGAACTGTCGGTGGATGATTTTGAGGGAAAACACAAAGAGACTCTGTGTTCCTTGATAAATGAGATGCCACTCTTGGAGAAACTATTTATTGATGCAGCTGATTGGAGTGAAGTAATTGAGTTGTACATTACGTCACCTATGTCTACACTTAGGAAGCTTGTCCTATGGGGGACGTTAACAAGGTTAATGCCAAATTGGATTTCACAGTTCCCAAATCTCGTGCAACTGAGTTTGGGCGGCTCCAGGTTGACTAATGATGCATTGAAATCACTAAAAAATATGCCAAGGTTGTTGTTCCTCGATTTAAGTTACAATGCTTATGAAGGTGAAACTTTGAATTTTCAAAGTGGAGGGTTTCAGAAACTAAAGACACTGCAACTCATATTATTGGATCAATTGAAGTGCATCCTTATCGACAGAGGAGCACTGTGTTCTGTGGAAGAAATTGTTTTAGAAGACCTCTCCAAACTCAAAACAGTTCCCTCTGGAATTCAACACTTGGAGAAGCTTAAAGATCTCTATATCAACGACATGCCAACTGAATTTGAGCAGCGCATTGCTCCTGATGGAGGAGAAGACCACTGGATCATCCAAGATGTGCCCCATGTACGTATTTGGAGCAGGGATGCTGAAGAACCTTCGCATATATTCGGCAGAAGTCATCACTAA 2766 0.402 MAETAVSLAGQHALPKILEAVKMLRDLPKEVRDITDELESFQDFINDADKVAEAEEDDGRRHRIKERVVRLREAAFRMEDVIDEYNISCEDKQPDDPRCAALLCEAVAFIKTQILLLQSAYKIQDVKSLVRAERDAFQSHFPLEQRPTSSRGNQDVTWQKLRRDPLFIEEDEVVGLDGPRGILKNWLTKGREKRTVISVVGIAGVGKTTLAKQVYDQVRNNFECHALITVSQSFSAEGLLRHMLNELCKEKKEDPPKDVSTIEWLTEEVRNRLRNKRYVVLFDDVWNGKFWDHIESAVIDNKNGSRILITTRDEKVAEYCRKSSFVEVHKLEKPLTEEESLKLFCKKAFQYSSDGDCPEELKDISLEIVRKCKGLPLAIVAIGGLLSQKDESAPEWGQFSRDLSLDLERNSELNSITKILGLSYDDLPINLRSCLLYFGMYPEDYEVESDRLIRQWIAEGFVKHETGKTLEEVGQQYLSGLVRRSLVQVSSFGLDGNVEWCRVHDLIHDMILRKVKDTGFCQYIDGRDQSVSSKIVRRLTIATHDFSGSIGSSPIRSILIMTGKDENLSQDLVNKFPTNYMLLKVLDFEGSAFSYVPENLGNLCHLKYLSFRYTWITSLPKSIGKLQNLETLDIRDTDVSEMPEEISKLKKLRHLLAYYRCSIQWKDIGGMTSLQEIPPVIIDDDGVVIREVGKLKQLRELSVDDFEGKHKETLCSLINEMPLLEKLFIDAADWSEVIELYITSPMSTLRKLVLWGTLTRLMPNWISQFPNLVQLSLGGSRLTNDALKSLKNMPRLLFLDLSYNAYEGETLNFQSGGFQKLKTLQLILLDQLKCILIDRGALCSVEEIVLEDLSKLKTVPSGIQHLEKLKDLYINDMPTEFEQRIAPDGGEDHWIIQDVPHVRIWSRDAEEPSHIFGRSHH* 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0708 921 Gene3D - 424 515 IPR036388 -
Gso18g0708 921 Pfam Rx N-terminal domain 6 93 IPR041118 -
Gso18g0708 921 PANTHER - 26 883 - -
Gso18g0708 921 SUPERFAMILY L domain-like 502 881 - -
Gso18g0708 921 PRINTS Disease resistance protein signature 196 211 - -
Gso18g0708 921 PRINTS Disease resistance protein signature 272 286 - -
Gso18g0708 921 PRINTS Disease resistance protein signature 372 386 - -
Gso18g0708 921 PRINTS Disease resistance protein signature 624 640 - -
Gso18g0708 921 Gene3D Ribonuclease Inhibitor 555 887 IPR032675 -
Gso18g0708 921 Pfam NB-ARC domain 183 426 IPR002182 GO:0043531
Gso18g0708 921 Gene3D - 160 329 IPR027417 -
Gso18g0708 921 PANTHER DISEASE RESISTANCE PROTEIN RP 26 883 IPR044974 GO:0006952
Gso18g0708 921 CDD RX-CC_like 2 128 IPR038005 -
Gso18g0708 921 Gene3D - 5 115 - -
Gso18g0708 921 Gene3D - 334 423 IPR042197 -
Gso18g0708 921 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 438 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0708 Gso-Chr18 8202729 8205715 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0708 197 383 WRKY Transcription Factor Family AT5G45050 29.947 5.56e-14 74.7