Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0700 ATGTGTAACTGGGACTACTTAGTGTCCTTCGCTCGTGCGGTGTATCCAATAATTGTGGAAGTATTCAATCAGGTCAGGGGTGTAAAAAAGGAGTCTGCAGACATTGAAGCTGATCTGGAAAGCTTTAAAGCTTTCATCCATGGTGCTGATAAAGAAGCTGAAGATGAACAAGATGCTGATAGGCGTGAAGGAATCAAAAAAATGGTGAAACAGCTGAGAGAAGCAGCTTTTTGCATGGAAGATGTCATCGATGAATATGAGATCTCCTGTGAGGAAAAGCAACCTGGTGATCCTGGATGTGCAGTTTTACCCTGTGATGCTGTTGGCTTCACGAAAACTCTGATCCCTCGTATTCTATTAGCGTATAAGATTCACGATGTGAAATCACTTGCCTGTGGAATCAAGGAAAGATATGGTTTACGTAGCCAATTTTCTTTAGAACAAAGACCATACAGTTCTAGAGGAAATCAAAATGCCGCGTGGCAAAACATTAGACTGGCTGCTCTACATACTCATGAAGCTGACACTGAGGGTTTGGAAGGCCCGAGAAAAATTTTGAAAGATTGGTTGGTAGATGGACTCAAAGAGCTCACTGTCATCACCGTGGAAGGAATGGGAGGATTGGGTAAAACCACTCTCAGCAAGCAAGTTTTTGACAACCCAGATGTCCGTAAGCTTTTTGATTGTCATGCATGGATCACTGTATCTCAATCCTACACTGTAGTAGAATTGCTGAGGAAATTGTTGTGCAAGTTTTACGAAGATAAAAAGAATAGTCCTCCCCAGAATGTTTCTACCATGGATCGAGAGTCGTTGATAGATGAAGTGAGAAACTACCTGAACGGCAAGAGGTACGTTGTCGTATTTGATGATGTATGGAATAAAGAATTTTGGTATGACATTAAATTGGCCTTATTTGATAATAAAGAAAAGAGTAGGATATTAATCACAACCAGAGACAAAGATGTTGCAGTGTGTTGTAAGGAATCTTGTTTTGTTCATGTGCATAAGATGAATCCTTTAACTGAAGTAGAATCTTTGAAATTGTTCTATAAGAAGGCATTTCAGCGTGATTTTAATGGATGTTGTCCAGAAGGACTTGAAAATACATCTCTTGAAATTGTTAAGAAGTGTCAAGGTTTACCTCTAGCTATTGTGGTTATTGGTGGCCTTTTAGCTAACAAACCTAAAGACAAAGGTGAATGGGAAAGGTTTAGTCAGCGTCTAAGATTAGAGTTGGAGGGAAATTCTAGGTTAATTAGTATCATAAAAATTTTAAGTTTAAGTTATGATAATTTGCCATACAATCTCAAATCATGTTTATTGTATTTCGGAATGTATCCTGAAGACTATGAAGTTAAATCTAGTAGATTGATTAGACAGTGGATAGCAGAATGGTTTGTGAAATATGAAGGGAGGAAAACTTTGAAAGAACTTGCACAACAATATTTAACAGAGTTGATTAATAGAAGTCTGGTACAAGTGACTTCATTCACCATCGATGGAAAAGTTAAGACATGCTGTGTCCATGACTCAATACGTGAGATGATCATTAGAAAAATCAAGGATACGGGATTTTGTCAGTATGTTGGTGAGCGTGATCAATCTGTGTCAAGTGAGATTGATGAGCATGATCAATTAGTGTCAAGTGGGATCATTCGACGCCTGACAATTGCAACGGGTTCCAATGATTTAAGCATTGAAAGCTCACACATTAGGGCGATTCTATTTTTCACAAACAAAGGATTATCTCAAGATTTCATCAATAGAATTCCCGCAAACTCCACTCCATTGAAGGTACTTGATTTTGAAGATGCTCGATTATATCATGTCCCTGAAAATTTGGGGAATTTAATCTACTTGAAGTATTTAAGCTTCAGGAATACAAGAGTAAAAAGTCTTCCAAGATCCATTGGTAAGCTCCAAAACTTGGAGACCTTGGATGTGCGACAAACAAATGTGCATGAGATGCCAAAGGAGATTAGTGAGCTTAGAAAACTATGTCATCTTCTGGCTAACAAGATATCTTCCGTTCAATTGAAGGATAGTCTTGGAGGCATGACATCTCTACAAAAGATATCTATGCTGATAATTGATTATGATGGAGTGGTGATTAGAGAGCTAGGAAAGCTAAAGAAGTTAAGAAATCTGAGCATTACTGAATTCAGAGAAGCACACAAAAACGCTCTGTGTTCCTCATTAAATGAGATGCGTCATTTGGAGAAACTATTTGTTGATACAGACGAAGACCACCAAGTAATTGACTTGCCCTTTATGTCATCCTTGTCTACACTTAGGAAGCTTTGCCTAAGTGGGGAGTTAACAAAGTGGCCAGATTGGATTCCAAAGCTCCTTAATCTTACAAAATTGTCCTTGATGTGCTCTAACTTAATTTATGATCCATTGGAATCACTAAAAGATATGCCAAGTTTGTTGTTCCTCTCTATCAGCCGTCGTGCTTATCAAGGTAGAGCTTTGCATTTTCAATATGGAGGGTTTCAGAAACTAAAGGAACTAAAGCTCGAAGATTTGCATTACTTGAGTTCCATCTCTATTGATGAAGGAGCGCTGCATTCTTTGGAAAAGCTTCAGTTATACAGAATCCCTCAACTCAAGAAAATACCCTCTGGCATTCAACACTTGAAGAAACTTAAAGTTCTCAATATGTGGTTTATGCCCACTGAGTTTGAGCAAAGCATTTCTCTCAATGGAGGACAAGAGCGTTGGGTCATCCAGCATGTGCCCCATGTAACATTATTTTCCGGGTTGGTGTAG 2775 0.3852 MCNWDYLVSFARAVYPIIVEVFNQVRGVKKESADIEADLESFKAFIHGADKEAEDEQDADRREGIKKMVKQLREAAFCMEDVIDEYEISCEEKQPGDPGCAVLPCDAVGFTKTLIPRILLAYKIHDVKSLACGIKERYGLRSQFSLEQRPYSSRGNQNAAWQNIRLAALHTHEADTEGLEGPRKILKDWLVDGLKELTVITVEGMGGLGKTTLSKQVFDNPDVRKLFDCHAWITVSQSYTVVELLRKLLCKFYEDKKNSPPQNVSTMDRESLIDEVRNYLNGKRYVVVFDDVWNKEFWYDIKLALFDNKEKSRILITTRDKDVAVCCKESCFVHVHKMNPLTEVESLKLFYKKAFQRDFNGCCPEGLENTSLEIVKKCQGLPLAIVVIGGLLANKPKDKGEWERFSQRLRLELEGNSRLISIIKILSLSYDNLPYNLKSCLLYFGMYPEDYEVKSSRLIRQWIAEWFVKYEGRKTLKELAQQYLTELINRSLVQVTSFTIDGKVKTCCVHDSIREMIIRKIKDTGFCQYVGERDQSVSSEIDEHDQLVSSGIIRRLTIATGSNDLSIESSHIRAILFFTNKGLSQDFINRIPANSTPLKVLDFEDARLYHVPENLGNLIYLKYLSFRNTRVKSLPRSIGKLQNLETLDVRQTNVHEMPKEISELRKLCHLLANKISSVQLKDSLGGMTSLQKISMLIIDYDGVVIRELGKLKKLRNLSITEFREAHKNALCSSLNEMRHLEKLFVDTDEDHQVIDLPFMSSLSTLRKLCLSGELTKWPDWIPKLLNLTKLSLMCSNLIYDPLESLKDMPSLLFLSISRRAYQGRALHFQYGGFQKLKELKLEDLHYLSSISIDEGALHSLEKLQLYRIPQLKKIPSGIQHLKKLKVLNMWFMPTEFEQSISLNGGQERWVIQHVPHVTLFSGLV* 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0700 924 CDD RX-CC_like 25 129 IPR038005 -
Gso18g0700 924 Gene3D - 169 334 IPR027417 -
Gso18g0700 924 PRINTS Disease resistance protein signature 199 214 - -
Gso18g0700 924 PRINTS Disease resistance protein signature 279 293 - -
Gso18g0700 924 PRINTS Disease resistance protein signature 378 392 - -
Gso18g0700 924 PRINTS Disease resistance protein signature 639 655 - -
Gso18g0700 924 PANTHER - 44 896 - -
Gso18g0700 924 PANTHER DISEASE RESISTANCE PROTEIN RP 44 896 IPR044974 GO:0006952
Gso18g0700 924 Gene3D - 9 118 - -
Gso18g0700 924 SUPERFAMILY L domain-like 568 900 - -
Gso18g0700 924 Gene3D - 430 520 IPR036388 -
Gso18g0700 924 Gene3D - 340 429 IPR042197 -
Gso18g0700 924 Pfam Rx N-terminal domain 18 94 IPR041118 -
Gso18g0700 924 Gene3D Ribonuclease Inhibitor 568 905 IPR032675 -
Gso18g0700 924 Pfam NB-ARC domain 186 432 IPR002182 GO:0043531
Gso18g0700 924 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 444 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0700 Gso-Chr18 8042854 8047058 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0700 196 397 WRKY Transcription Factor Family AT5G45050 31.034 2.11e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0700 K13457 - gmx:100799057 950.658