Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0698 ATGGCAGAAACTGCAGTGTCCTTGGCTGGTAAGCATGCGCTTCCAAAAATATTGGAAGCTGTCAAAATGGTGAGAGATCTCCCAAAAGAAGTTAGAGACATTACAGATGAACTTGAAAGCTTTCAAGATTTCATTAATGATGCTGATAAAGTGGCTGAAGCTGAACAAGATGATGGAAGGCGTCATAGAATAAAAGAAAGGGTGATGCGGCTGAGAGAAGCAGCTTTTTGCATGGAAGATGTCATCGATGAATATAACATCTCCTGTGAGGATAAGCAACCTGGTGATCCTCGATGTGCAGCTTTACTATGTGAGGCTGTTGCCTTCATCAAAACTCAAATCCTTCTCCTTCAAAGTGCGTATAAGATTCAGGATGTTAAATCCCTTGTTCGTGCTGAAAGAGATGGTTTCCAAACCCATTTTCCTTTAGAACCAAGACTAACAAGTTCTAGAGGAAATCAAGATGTCACCTGGCAGAAACTTCGAATGGATCCTCTCTTTATCGATGAAGATGATGTTGTGGGGCTTGATGGCCCTAGAGATACATTGAAAAATTGGTTGACAAAGGGAAGAGAAAAACGCACTGTAATCTCTGTGGTGGGAATTCCTGGGGTGGGAAAAACCACTCTTGCCAAGCAAGTTTATGACCAGGTGCGTAACAATTTCGAGTGCCATGCATTGATCACAGTGTCTCAATCCTACTCTGCAGAAGGACTACTGAGGCGTTTGTTGGATGAGCTTTGCAAAGTGAAAAAGGAGGACCCTCCCAAGGATGTTTCTAACATGGAGTCGTTGACCGAAGAAGTCAGAAACCGCTTGCGCAACAAGAGGTATGTTGTCTTGTTTGATGACGTATGGAATGAAACATTTTGGGATCACATTGAATCTGCTGTAATTGATAATAAAAATGGAAGTAGGATTTTAATCACAACCAGGGATGAGAAGGTTGCGGGATATTGTAAGAAATCTTCTTTTGTTGAGGTGCTTAAGCTAGAAGAGCCATTAACTGAACAAGAATCATTGAAATTGTTTTCTAAGAAGGCATTTCAGTATAGTTCCGATGGAGATTGTCCAGAAGAACTTAAAGATATATCTCTTCAAATTGTTAGAAAGTGTAAAGGTTTACCTCTAGCAATAGTGGCCGTTGGTGGTCTTTTGTCTCAAAAAGATGAAAGTGCACCTGAATGGGGACAGTTTAGTCGAGATCTAAGTTTAGACTTGGAGAGGAATTCTGAGTTAAATAGTATAACAAAAATTTTAGGTCTAAGTTATGAATATTTGCCGATCAATCTCAGATCATGTTTATTGTATTTCGGAATATATCCGGAGGACTATGAAATTAAATCTGATAGATTGATTAGACAGTGGATAGCTGAAGGGTTTGTCAAACATGAAACCGGAAAAACATTGGAAGAAGTTGGGCAACAATATTTATCAGGGTTGGTCCGTAGAAGTTTGGTGCAAGTATCCTCATTTAGAATTGATGGCAAAGTTAAAAGTTGTGGTGTTCATGACTTAATACACGACATGATCCTTAGAAAAGTCAAGGATACAGGGTTTTGTCAGTATATTGACGGGTGTGATCAATCTGTATCAAGTAAGATTGTTCGACGCCTGACAATTGCCACCGATGATTTTAGTGAAAGTATAGGAAGCTCATCCATTCGGTCAATTTTTATTAGCACAGGAGAAGATGAAGTATTTGAACACTTAGTAAACAAAATCCCTACAAATTACATGCTATTGAAGGTACTTGATTTTGAAGGTTCTGGTTTACGTTATGTTCCTGAAAATTTGGGGAATTTATGCCACTTGAAGTATTTAAGCTTCCGGTATACAGGGATAGAAAGTCTACCAAAATCAATTGGCAAGCTCCAGAATTTGGAGACCTTGGATATAAGAGACACAGGTGTGTCTGAGATGCCAGAGGAGATTAGTAATGTTACTAAGCTACGCCATCTTCTGTCTTATTTTACGGGTTTAATTCAATGGAAGGATATTGGAGGCATGACATCCCTACAAGAGATACCTCCAGTGATTATAGATGATGATGGAGTGGTCATTAGAGAGGTAGGAAAGCTAAAGCAGTTAAGGGAACTGTCGGTGGTATATTTTAGGGGAAAACACGAAAAGACTTTGTGTTCCTTAATAAATGAGATGCCACTCTTGGAGAAAGTACGTATTGATACAGCTGATGAGAGTGAAGTAATTGACTTGTACATTACGTCACCTATGTCTACACTTAAGAAGCTTGTCCTACGTGGGACGTTAACAAGGTTGCCAAATTGGATTTCACAGTTCCCAAATCTTGTGCAACTGTATTTGAGCGGCTCCAGGTTGACTAATGATGCATTGAAATCACTAAAAAATATGCCAAGGTTGATGCTCCTCTTTTTAAGTGACAATGCTTATGAAGGTGAAACTTTGAATTTTCAAAGTGGAGGGTTTCAGAAACTAAAGACACTGCTACTCAAATCTTTGAATAAGTTGGAGTCCATCCTTATCGACAGAGGAGCACTGTGTTCTTTGGAACTATTTTCTTTACGAGAACTCTCCCAACTCAAAACAGTACCCTCTGGAATTCAACACTTGGAGAAACTTAAAGATCTCTATATCGAGGACATGCCAACTGAATTTGAGCAGCGCACTGCTCCTGATGGAGGAGAAGACCACTGGATCATCCAAGATGTGCCCCATGTACGTATTTGGAGTGAAGATGCTGAAGAACCTTTGCATATGTTCGGCAGAAGTCATCACTAA 2760 0.3967 MAETAVSLAGKHALPKILEAVKMVRDLPKEVRDITDELESFQDFINDADKVAEAEQDDGRRHRIKERVMRLREAAFCMEDVIDEYNISCEDKQPGDPRCAALLCEAVAFIKTQILLLQSAYKIQDVKSLVRAERDGFQTHFPLEPRLTSSRGNQDVTWQKLRMDPLFIDEDDVVGLDGPRDTLKNWLTKGREKRTVISVVGIPGVGKTTLAKQVYDQVRNNFECHALITVSQSYSAEGLLRRLLDELCKVKKEDPPKDVSNMESLTEEVRNRLRNKRYVVLFDDVWNETFWDHIESAVIDNKNGSRILITTRDEKVAGYCKKSSFVEVLKLEEPLTEQESLKLFSKKAFQYSSDGDCPEELKDISLQIVRKCKGLPLAIVAVGGLLSQKDESAPEWGQFSRDLSLDLERNSELNSITKILGLSYEYLPINLRSCLLYFGIYPEDYEIKSDRLIRQWIAEGFVKHETGKTLEEVGQQYLSGLVRRSLVQVSSFRIDGKVKSCGVHDLIHDMILRKVKDTGFCQYIDGCDQSVSSKIVRRLTIATDDFSESIGSSSIRSIFISTGEDEVFEHLVNKIPTNYMLLKVLDFEGSGLRYVPENLGNLCHLKYLSFRYTGIESLPKSIGKLQNLETLDIRDTGVSEMPEEISNVTKLRHLLSYFTGLIQWKDIGGMTSLQEIPPVIIDDDGVVIREVGKLKQLRELSVVYFRGKHEKTLCSLINEMPLLEKVRIDTADESEVIDLYITSPMSTLKKLVLRGTLTRLPNWISQFPNLVQLYLSGSRLTNDALKSLKNMPRLMLLFLSDNAYEGETLNFQSGGFQKLKTLLLKSLNKLESILIDRGALCSLELFSLRELSQLKTVPSGIQHLEKLKDLYIEDMPTEFEQRTAPDGGEDHWIIQDVPHVRIWSEDAEEPLHMFGRSHH* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0698 919 SUPERFAMILY L domain-like 503 879 - -
Gso18g0698 919 Gene3D - 5 115 - -
Gso18g0698 919 PANTHER - 26 881 - -
Gso18g0698 919 Pfam NB-ARC domain 181 425 IPR002182 GO:0043531
Gso18g0698 919 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 438 IPR027417 -
Gso18g0698 919 Pfam Rx N-terminal domain 11 93 IPR041118 -
Gso18g0698 919 PANTHER DISEASE RESISTANCE PROTEIN RP 26 881 IPR044974 GO:0006952
Gso18g0698 919 PRINTS Disease resistance protein signature 196 211 - -
Gso18g0698 919 PRINTS Disease resistance protein signature 272 286 - -
Gso18g0698 919 PRINTS Disease resistance protein signature 372 386 - -
Gso18g0698 919 PRINTS Disease resistance protein signature 623 639 - -
Gso18g0698 919 CDD RX-CC_like 2 128 IPR038005 -
Gso18g0698 919 Gene3D - 424 515 IPR036388 -
Gso18g0698 919 Gene3D - 163 328 IPR027417 -
Gso18g0698 919 Gene3D - 334 423 IPR042197 -
Gso18g0698 919 Gene3D Ribonuclease Inhibitor 554 884 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0698 Gso-Chr18 7991949 7997840 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0698 197 872 WRKY Transcription Factor Family AT5G45050 23.422 2.13e-15 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0698 K13457 - gmx:100809266 1785