Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0697 ATGGCAGAAACTGCAGTGTCCTTGGCTGGTCAGCATGCGCTTCCAAAAATATTGGAAGCTGTCAAAATGCTGAGAGATCTCCCAAACGAAGTTAGAGACATTACAGATGAACTTGAAAGCTTTCAAGATTTCATCAATGATGCTGATAAAGTGGCTGAAGCTGAAGAAGATGATAGAAGGCGTCATAGAATAAAAGAAAGGGTGATGCGGCTGAGAGAAGCAGCTTTTCGCATGGAAGATGTCATCGATGAATATAACATCTCCGGTGAGGATGAGCAACCTGATGATCCTCGATGTGCAGCTTTACTATGTGAGGCTGTTGCCTTCATCAAAACTCAAATCCTTCGCCTTCAAAGTGCATATAAGATTCAGGATGTTAAATCGCTTGTTCGTGCTGAAAGAGATGGTTTCCAACGCCATTTTCCTTTAGAGCAAAGACCAACCAGTTCTAGAGGAAATCAAGATGTCACCTGGAAGAATCTTAGAAGGGTTCCTCTCTTTATTGAGGAGGATGAGGTTGTGGGGCTCGATAACGATAGAGCTACATTGAAAAATTGGTTGACAAAGGGAAGAGAAAAACGCACTGTCATCTCAGTGGTGGGAATTGCAGGGGTGGGAAAAACAACTCTTGCCAAGCAAGTTTATGACCAGGTGCGTAACAATTTCGAGTGCCATGCATTGATCACAGTGTCTCAATCCTACTCTGCAGAAGGACTGCTGAGGCGTTTGTTGGATGAGCTTTGCAAACTGAAAAAGGAGGACCCTCCCAAGGATGTTTCTAACATGGAGTCGTTGATCGAAGAAGTCAGAAACCGCTTGCGCAACAAGAGGTATGTTGTCTTGTTTGATGACGTATGGAATGAAACATTTTGGGATCACATTGAATCTGCTGTAATTGATAATAAAAATGGAAGTAGGATATTAATCACAACCAGGGATGAGAAGGTTGCGGGATATTGTAGGAAATCATCATTTGTTGAGGTGCATAAGCTAGAAAAACCTTTAACTGAAGAAGAATCATTGAAATTGTTCTGTAAGAAGGCATTTCAGAATAGTTCCAATGGAGATTGTCCAGAAGAACTTAAAGATATATCTCTTCAAATTGTTAGAAAGTGTAAAGGTTTACCTCTAGCAATAGTTGTCATTGGTGGTCTTTTGTCTCAAAAAGATGAAAATGCACCTGAATGGGGACAGTTTAGTCGAGATCTAAGTTTAGACTTGGAGAGGAAATCTGAGTTAAATAGTATAACAAAAATTTTAGGTTTAAGTTATGATGATTTGCCGATCAATCTCAGATCATGTTTATTGTATTTCGGAATGTATCCGGAGGACTATGAAGTTCAATCTGATAGATTGATTAGACAGTGGATAGCTGAAGGGTTTGTCAGACATGAAACCGGAAAATCTTTGGAAGAAGTTGGGCATCAATATTTATCAGGGTTGGTCCGTAGAAGTTTGGTGCAAGTATCCTCACTTAGAATTGATGGCAAAGTTAAAAGGTGTCGTGTTCATGACTTAATACACGACATGATCCTTAGAAAAGTCAAGGATACAGGATTTTGTCAGTATATTGACGGGCCTGATCAATCTGTATCAAGTAAGATTGTTCGACGCCTGACAATTGCAACCGATGATTTTAGTGGAAGTATAGGAAGCTCACCCATTCGGTCAATTTTTATTAGCACCGGAGAAGATGAAGTATCTCAACACTTAGTAAACAAAATCCCTACCAATTACATGCTAGTGAAGGTACTAGATTTTGAAGGTTCTGGTTTACGTGATGTTCCTGAAAATTTGGGGAATTTATGCCACTTGAAGTATTTAAGCTTCCGGTATACAGGGATAGCAAGTCTACCAAAATCCATTGGTAAGCTCCAGAATTTGGAGACCTTGGATATAAGAGACACACATGTGTCTGAGATGCCAGAGGAGATTAGTAAGCTTACTAAGCTACGCCATCTTCTGTCTTATTTTACGGGTTTAATTCAATGGAAGGATATTGGAGGCATGACATCCCTACAAGAGATACCTCCAGTGACTATAGATGATGATGGAGTGGTCATTAGAGAGGTAGAAAAGCTAAAGCAGTTAAGGAAACTGTGGGTGGAAGATTTTAGGGGAAAACACGAAAAGACTCTGTGTTCCTTAATAAATGAGATGCCACTCTTGGAGAAACTACTTATTAATAGAGCTGATGAGAGTGAAGTAATTGAGTTGTACATTACGTCACCTATGTCTACACTTAGGAAGCTTGTCCTATTTGGGAAGTTAACAAGGTTTCCAAATTGGATTTCACAGTTCCCAAATCTTGTGCAACTGCGTTTGGGCGGCTCCAGGTTGACTAATGATGCATTGAAATCACTAAAAAATATGCCAAGGTTGTTGTTCCTCGGTTTAGGTTACAATGCTTATGAAGGTGAAACTTTGCGTTTTCATTGTGGAGGGTTTCAGAAACTAAAGCAACTGTCCCTCGGAAGTTTGGATCAATTGAAGTGCATCCTTATCGACAGAGGAGCACTGTGTTCTGTGGAAGAAATTGTTTTAAATGACCTCTCCCAACTCAAAACAGTTCCCTCTGGAATTCAACACTTGGAGAAGCTTAAAAATCTCTATATCGACGACATGCCAACTGAATTTGAGCAGCGCATTGCTCCTGATGGAGGAGAAGACCACTGGATCATCCAAGATGTGCCCCATGTACGTATTTGGAGCACGTATGCTGAAGAACCTTCGCATATATTAGGCAGAAGTCATCACTAA 2760 0.4036 MAETAVSLAGQHALPKILEAVKMLRDLPNEVRDITDELESFQDFINDADKVAEAEEDDRRRHRIKERVMRLREAAFRMEDVIDEYNISGEDEQPDDPRCAALLCEAVAFIKTQILRLQSAYKIQDVKSLVRAERDGFQRHFPLEQRPTSSRGNQDVTWKNLRRVPLFIEEDEVVGLDNDRATLKNWLTKGREKRTVISVVGIAGVGKTTLAKQVYDQVRNNFECHALITVSQSYSAEGLLRRLLDELCKLKKEDPPKDVSNMESLIEEVRNRLRNKRYVVLFDDVWNETFWDHIESAVIDNKNGSRILITTRDEKVAGYCRKSSFVEVHKLEKPLTEEESLKLFCKKAFQNSSNGDCPEELKDISLQIVRKCKGLPLAIVVIGGLLSQKDENAPEWGQFSRDLSLDLERKSELNSITKILGLSYDDLPINLRSCLLYFGMYPEDYEVQSDRLIRQWIAEGFVRHETGKSLEEVGHQYLSGLVRRSLVQVSSLRIDGKVKRCRVHDLIHDMILRKVKDTGFCQYIDGPDQSVSSKIVRRLTIATDDFSGSIGSSPIRSIFISTGEDEVSQHLVNKIPTNYMLVKVLDFEGSGLRDVPENLGNLCHLKYLSFRYTGIASLPKSIGKLQNLETLDIRDTHVSEMPEEISKLTKLRHLLSYFTGLIQWKDIGGMTSLQEIPPVTIDDDGVVIREVEKLKQLRKLWVEDFRGKHEKTLCSLINEMPLLEKLLINRADESEVIELYITSPMSTLRKLVLFGKLTRFPNWISQFPNLVQLRLGGSRLTNDALKSLKNMPRLLFLGLGYNAYEGETLRFHCGGFQKLKQLSLGSLDQLKCILIDRGALCSVEEIVLNDLSQLKTVPSGIQHLEKLKNLYIDDMPTEFEQRIAPDGGEDHWIIQDVPHVRIWSTYAEEPSHILGRSHH* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0697 919 Pfam Rx N-terminal domain 6 93 IPR041118 -
Gso18g0697 919 PRINTS Disease resistance protein signature 196 211 - -
Gso18g0697 919 PRINTS Disease resistance protein signature 272 286 - -
Gso18g0697 919 PRINTS Disease resistance protein signature 372 386 - -
Gso18g0697 919 PRINTS Disease resistance protein signature 623 639 - -
Gso18g0697 919 SUPERFAMILY L domain-like 502 879 - -
Gso18g0697 919 Gene3D - 334 423 IPR042197 -
Gso18g0697 919 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 438 IPR027417 -
Gso18g0697 919 Gene3D - 5 120 - -
Gso18g0697 919 Gene3D Ribonuclease Inhibitor 560 885 IPR032675 -
Gso18g0697 919 PANTHER - 27 879 - -
Gso18g0697 919 Gene3D - 424 515 IPR036388 -
Gso18g0697 919 CDD RX-CC_like 2 128 IPR038005 -
Gso18g0697 919 Pfam NB-ARC domain 182 426 IPR002182 GO:0043531
Gso18g0697 919 PANTHER DISEASE RESISTANCE PROTEIN RP 27 879 IPR044974 GO:0006952
Gso18g0697 919 Gene3D - 161 329 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0697 Gso-Chr18 7952304 7956036 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0697 197 510 WRKY Transcription Factor Family AT5G45050 27.070 6.34e-15 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0697 K13457 - gmx:100805006 1786.54