Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0689 ATGATGCCGAGTGTTAAGTCTGATGCATCTGACAAAGACTCAGAACCATTTGTTGAAGTTGATCCAACAAGAAGATATGGCAGATACAGTGAACTATTAGGATCTGGTGCTGTGAAAAAGGTGTATAGGGCATTTGATCAAGAAGAGGGAATAGAGGTGGCTTGGAACCAAGTGAAGCTGAGGAACTTCAGTGATGACCCTGCCATGCTGGATAGGCTTTACTCTGAAGTGAGGTTGCTAAGAAGCTTGACCAACAAAAACATCATTTCCCTCTACAGTGTTTGGAGGGATGAGAAGCACAACACCTTGAACTTCATCACTGAGGTCTGCACCAGTGGGAATCTGAGGAAGTACAGGAAGAAGCACAGACATGTGTCCATGAGGGCCTTGAAAAAGTGGTCCAAGCAGATATTGGAAGGATTGAATTACTTGCATTTGCATGACCCTTGTATCATCCACAGAGACCTCAACTGCAGCAATGTGTTTGTGAATGGGAATACTGGCCAGGTTAAGATTGGCGACTTGGGTTTGGCAGCAATAGTGGGGAAGAGCCACTCTGCACATTCAATTCTTGGGACACCAGAATTCATGGCGCCTGAGTTATATGATGAGGACTACACTGAAATGGTTGACATATACTCATTTGGAATGTGTGTCTTAGAGATGGTGACACTAGAGATTCCATATAGCGAGTGTGACAGTGTTGCCAAGATATACAAGAAAGTGTCATCAGGTGTGAGACCACAGGCCTTGAACAAGATCAAAGATGCTGAGGTGAAGGCTTTCATTGAGAGGTGCCTTGCTCAACCAAGGGCTAGACCTTCTGCTGCTGAGTTGCTCAAGGACCCCTTCTTTGATGTGCTTGATGGTGACGAAAATGACGATTTTAATGCTCCATGA 900 0.4489 MMPSVKSDASDKDSEPFVEVDPTRRYGRYSELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRNFSDDPAMLDRLYSEVRLLRSLTNKNIISLYSVWRDEKHNTLNFITEVCTSGNLRKYRKKHRHVSMRALKKWSKQILEGLNYLHLHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKSHSAHSILGTPEFMAPELYDEDYTEMVDIYSFGMCVLEMVTLEIPYSECDSVAKIYKKVSSGVRPQALNKIKDAEVKAFIERCLAQPRARPSAAELLKDPFFDVLDGDENDDFNAP* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0689 299 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 295 - -
Gso18g0689 299 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0689 299 CDD STKc_WNK 25 285 - -
Gso18g0689 299 SUPERFAMILY Protein kinase-like (PK-like) 20 286 IPR011009 -
Gso18g0689 299 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Gso18g0689 299 Gene3D Transferase(Phosphotransferase) domain 1 110 289 - -
Gso18g0689 299 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g0689 299 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 2 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0689 Gso-Chr18 7837608 7840194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0689 1 286 MAP Kinase Kinase Kinase AT5G55560 82.759 0.0 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gso18g0689 Pkinase 1.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0689 K08867 - gmx:100782039 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0689 18 7837608 7840194 Gso8g2693 8 44587225 44589505 GST
Gso18g0689 18 7837608 7840194 Gso14g0140 14 1228652 1231250 PCT
Gso18g0689 18 7837608 7840194 Gso2g2525 2 49635090 49637633 PCT
Gso14g0140 14 1228652 1231250 Gso18g0689 18 7837608 7840194 PCT
Gso2g2525 2 49635090 49637633 Gso18g0689 18 7837608 7840194 PCT