Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0687 ATGGACGCCGGCGAAGCCCTCTCTGACGATCCGAATCGGCCCAATTCCGCCGCCGACGCAGCTCCGGCCACCGCCGGAGCAAGGTACAAGCTCATGTCACCGGCCAAGCTCCCGATCTCGCGCTCGCCGTGCGTCACGATTCCGCCGGGGCTCAGTCCGACGTCGTTTCTCGAGTCGCCGGTGCTGCTCTCCAACATGAAGGTGGAACCTTCACCGACTACAGGATCCCTTTCTTTGCTTCATCAAACAGCACATGGTTCCGTGACTTCTGCCGCATCTTCTACATTTCCTGTAACCACTGTTCCCGCAGACTTTGACAACCATGCAAGTGAAAAATCTACTCAAATAGATGGTCAAGGAAAAGCTCAAGCTTTTGATTCATCACCATTAGTAAAAAATGAGTCAGCATCCCCTTCAAATGAATTAAGTCTATCATCACCTGTTCAAATGGATTGCTCAGGAGGTAGTGCCCGTGTTGAAGGTGATTTGGATGAATTGAACCCTAGAAGCAACATAACAACTGGGCTTCAAGCATCACAAGTTGACAATAGAGGTAGTGGACTTTCCGTTGCAGCTGATAGAGTATCTGATGATGGATACAACTGGAGAAAATATGGGCAAAAACATGTTAAAGGAAGTGAATTTCCACGCAGTTATTACAAATGTACACATCCTAATTGTGAAGTCAAGAAACTATTTGAACGCTCTCATGATGGGCAGATCACTGAGATAATTTACAAGGGAACACATGATCATCCTAAACCTCAACCAAACCGCCGTTACTCTGCTGGAACTATTATGTCTGTGCAAGAAGAGAGATCTGATAAAGTTTCTTTGACCAGCCGAGATGACAATGGATCCTATATGTGTGGCCAGGGGTCTCACCTGGCTGAGCCTGACAGTCAACCAGAGCTATCGCCTGTAGCAACAAATGATGGTGATCTAGATGGTTTGGGGGTTTTGTCAAACCGGAATAATGATGAGGTTGATGATGATGATCCCTTCTCAAAGCGAAGAAAAATGGACCTTGGAATTGCTGACATCACTCCTGTAGTTAAGCCTATCCGGGAGCCACGGGTTGTTGTACAAACTCTGAGTGAGGTTGATATCTTGGATGATGGCTACCGCTGGCGCAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCTAACCCTAGGAGTTATTACAAATGCACGAACACCGGTTGCCCTGTTAGAAAACATGTGGAGAGGGCATCTCATGATCCAAAAGCTGTGATTACCACATATGAGGGGAAGCACAATCATGATGTTCCAACTGCAAGGAATAGTTGCCATGACATGGCAGGACCAGCAAGTGCAAGTGGACAGACAAGAATTAGGCCCGAAGAAAGTGATACCATCAGCCTTGACCTTGGGATGGGAATTAGCCCAGCTGCTGAAAACACACCAAACAGTCAAGGGAGAATGATGCTTTCTGAATTTGGGGATAGTCAAACTCACACCAGCAATTCCAATTTCAATTTTGTTCATACTACGACAGTGCCGGGGTACTTTGGTGTGCTAAATAACAACTCTAACCCATATGGTTCTAGAGAAAATCCAAGTGATGGTCCATCTTTAAACCATTCTGCTTATCCTTGCCCTCAGAACATAGGGAGAATACTAATGGGTCCTTAA 1656 0.465 MDAGEALSDDPNRPNSAADAAPATAGARYKLMSPAKLPISRSPCVTIPPGLSPTSFLESPVLLSNMKVEPSPTTGSLSLLHQTAHGSVTSAASSTFPVTTVPADFDNHASEKSTQIDGQGKAQAFDSSPLVKNESASPSNELSLSSPVQMDCSGGSARVEGDLDELNPRSNITTGLQASQVDNRGSGLSVAADRVSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPNRRYSAGTIMSVQEERSDKVSLTSRDDNGSYMCGQGSHLAEPDSQPELSPVATNDGDLDGLGVLSNRNNDEVDDDDPFSKRRKMDLGIADITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNTGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARNSCHDMAGPASASGQTRIRPEESDTISLDLGMGISPAAENTPNSQGRMMLSEFGDSQTHTSNSNFNFVHTTTVPGYFGVLNNNSNPYGSRENPSDGPSLNHSAYPCPQNIGRILMGP* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0687 551 MobiDBLite consensus disorder prediction 270 306 - -
Gso18g0687 551 MobiDBLite consensus disorder prediction 518 539 - -
Gso18g0687 551 MobiDBLite consensus disorder prediction 110 152 - -
Gso18g0687 551 MobiDBLite consensus disorder prediction 435 454 - -
Gso18g0687 551 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 14 87 IPR044810 GO:0003700
Gso18g0687 551 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 97 531 IPR044810 GO:0003700
Gso18g0687 551 SUPERFAMILY WRKY DNA-binding domain 363 431 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso18g0687 551 SUPERFAMILY WRKY DNA-binding domain 194 255 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso18g0687 551 MobiDBLite consensus disorder prediction 110 155 - -
Gso18g0687 551 Pfam WRKY DNA -binding domain 372 428 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso18g0687 551 Pfam WRKY DNA -binding domain 197 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso18g0687 551 MobiDBLite consensus disorder prediction 1 24 - -
Gso18g0687 551 ProSiteProfiles WRKY domain profile. 366 431 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso18g0687 551 ProSiteProfiles WRKY domain profile. 191 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso18g0687 551 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 97 531 - -
Gso18g0687 551 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 14 87 - -
Gso18g0687 551 SMART WRKY_cls 371 430 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso18g0687 551 SMART WRKY_cls 196 254 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso18g0687 551 MobiDBLite consensus disorder prediction 317 336 - -
Gso18g0687 551 Gene3D WRKY domain 356 432 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso18g0687 551 Gene3D WRKY domain 188 256 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0687 Gso-Chr18 7801758 7807775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0687 32 551 WRKY Transcription Factor Family AT4G26640 55.535 4.75e-180 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso18g0687 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0687 - - gmx:100781491 1085.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0687 18 7801758 7807775 Gso8g2695 8 44611966 44617910 GST
Gso18g0687 18 7801758 7807775 Gso14g0138 14 1204617 1210161 PCT
Gso18g0687 18 7801758 7807775 Gso2g2527 2 49651039 49656880 PCT
Gso14g0138 14 1204617 1210161 Gso18g0687 18 7801758 7807775 PCT
Gso2g2527 2 49651039 49656880 Gso18g0687 18 7801758 7807775 PCT