Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0686 ATGCAAACATCTCAGAATCATAAAATTTCTTATGGCTCTGGCGGGTTCTATGTTGAGCCTGTGCAAAATTTGGAGTCATATTGCATGCCATCAAGTGAGAACATAGACAATTACTCTTCCTCTGATAACAGCAGCCAAACAACCTACCCTTCAGTCCAAACTTTAGAACAATATTGCACCCTTGAATCTGCTTCCACAGGCAACAGTTTCCCTAACCAAAATTCTCCACCTGCTCTCAGTTTCTCATCTAACAATAGTCCATTGTCAAAGCTAGAGTCAAATTCATATGTGTTAAGGCCACAGCATTCTCTTGAAATTGCTAGTGGCTCGCCTGAGGATGATTCTTATTTGGCGCATGACCTTGATGACCTGACACATAAGATAAGAGAGCTGGAAACTGCTATGCTAGGACCTAATGCAGATATGCTAGATATCTATGGTACTGTAATTCCAGAACCTGATTCATTTTTGTTAGAGGCAGAGAAGTGGAAGAAATTGATGGAGATGTCATCTAGAGGGGATTTGAAAGAGATGCTTTATACTTGTGCAGAAGCAATGGCTAGGAATGATATGGAGACAACTGATTGGCTGGTGTCTGAGTTACGTAAGATGGTGTCCATTTCGGGCAATCCGATACAGCGATTGGGAGCATACATATTGGAGTCATTTGTTGCAAGGATGGCTGCTTCAGGAAGCACAATCTACAAGTCCTTAAAATGTAGTGAGCCTACTGGTAATGAACTACTTTCATACATGCATGTGCTTTATGAAATTTGTCCATACTTCAAGTTTGGGTACATGTCGGCAAATGGAGCAATTGCTGAAGCTCTGAAGGAGGAAAGTGAAGTCCACATAGTTGACTTTCAGATTGGCCAGGGAACCCAGTGGGTGAGCTTGATTCAGGCTCTAGCTCACCGCCCTGGAGGGCCCCCGAAGATCCGAATATCCGGTGTTGATGACTCCTATTCGGCTTATGCCAGGGGAAGAGGGCTTGATATTGTTGGGAAAAGGTTATCTGCACATGCACAGTCATGTCATGTGCCTTTTGAGTTCAATGCTGTAAGAGTACCTGCTTCTCAGGTGCAACTTGAAGACCTTGAACTTCTCCCTTATGAAGCTGTGGCAGTGAACTTTGCCATAAGTCTGCACCATGTGCCAGATGAAAGTGTGAACAGTCACAATCATCGTGACCGATTGTTGAGATTGGCAAAGCGATTATCTCCTAAAGTGGTGACTTTGGTTGAGCAGGAATTTAGCACCAACAATGCGCCATTCTTGCAGCGCTTTGATGAGACAATGAAGTACTACTTGGCTGTTTTTGAATCGATTGATACTGTTCTTCCAAGGGAGCACAAAGAGAGGATTAATGTGGAGCAGCATTGTTTGGCTCGCGAAGTTGTCAACTTAATAGCATGTGAAGGAGAAGAAAGAGTTGAACGCCACGAGCTTCTGAATAAGTGGAAAATGCGTTTCACAAAGGCTGGATTTACACCTTATCCATTGAGCTCCGTTATTAACTCTTCAATCAAGGATCTTCTGCAGAGCTACCATGGACACTACACTCTAGAAGAGAGAGATGGTGCACTATTTCTTGGTTGGATGAATCAAGTTCTTATTGCATCTTGTGCTTGGAGCTAA 1638 0.4328 MQTSQNHKISYGSGGFYVEPVQNLESYCMPSSENIDNYSSSDNSSQTTYPSVQTLEQYCTLESASTGNSFPNQNSPPALSFSSNNSPLSKLESNSYVLRPQHSLEIASGSPEDDSYLAHDLDDLTHKIRELETAMLGPNADMLDIYGTVIPEPDSFLLEAEKWKKLMEMSSRGDLKEMLYTCAEAMARNDMETTDWLVSELRKMVSISGNPIQRLGAYILESFVARMAASGSTIYKSLKCSEPTGNELLSYMHVLYEICPYFKFGYMSANGAIAEALKEESEVHIVDFQIGQGTQWVSLIQALAHRPGGPPKIRISGVDDSYSAYARGRGLDIVGKRLSAHAQSCHVPFEFNAVRVPASQVQLEDLELLPYEAVAVNFAISLHHVPDESVNSHNHRDRLLRLAKRLSPKVVTLVEQEFSTNNAPFLQRFDETMKYYLAVFESIDTVLPREHKERINVEQHCLAREVVNLIACEGEERVERHELLNKWKMRFTKAGFTPYPLSSVINSSIKDLLQSYHGHYTLEERDGALFLGWMNQVLIASCAWS* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0686 545 MobiDBLite consensus disorder prediction 64 85 - -
Gso18g0686 545 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 17 544 IPR005202 -
Gso18g0686 545 Pfam GRAS domain family 175 544 IPR005202 -
Gso18g0686 545 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 17 544 - -
Gso18g0686 545 ProSiteProfiles GRAS family profile. 166 545 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0686 Gso-Chr18 7796568 7800105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0686 1 544 GRAS Transcription Factor Family AT1G50600 54.645 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso18g0686 GRAS 1.4e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0686 - - gmx:100785400 1070.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0686 18 7796568 7800105 Gso8g2696 8 44622951 44626418 GST
Gso18g0686 18 7796568 7800105 Gso14g0136 14 1197385 1200720 PCT
Gso18g0686 18 7796568 7800105 Gso2g2529 2 49666919 49670195 PCT
Gso14g0136 14 1197385 1200720 Gso18g0686 18 7796568 7800105 PCT
Gso2g2529 2 49666919 49670195 Gso18g0686 18 7796568 7800105 PCT