Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0680 ATGGATCTTCAACTTCTCTACTTCACATCCATATTCTCCATTTTCATTTTCATGTTCATGACACACAAAATAGTAACCAAAAAATCTAACTCCACTCCAAGTTTACCACCAGGACCATGGAAGCTACCTATCATAGGGAACATGCACAACCTTGTTGGCTCTCCACTTCCCCATCATAGACTAAGAGATTTGTCAGCAAAATATGGATCCTTGATGCATCTGAAGCTTGGAGAGGTTTCAACAATTGTGGTTTCATCACCAGAATATGCCAAGGAGGTGATGAAAACACATGATCATATCTTTGCATCTAGGCCTTATGTCCTTGCTGCGGAGATAATGGACTATGATTTCAAAGGTGTAGCTTTCACACCTTATGGTGATTACTGGAGACAGCTAAGGAAGATCTTTGCATTGGAGCTATTAAGTTCCAAACGTGTCCAATCTTTCCAACCAATCAGAGAGGAAGTGCTCACAAGTTTCATCAAAAGGATGGCTACAATAGAAGGATCACAGGTTAACATTACCAAAGAAGTGATTTCAACTGTCTTTACAATAACTGCAAGGACAGCCCTTGGCAGCAAGAGCAGGCACCATCAGAAGCTAATATCGGTGGTAACCGAAGCCGCAAAGATTTCTGGAGGTTTTGACTTGGGAGATTTGTACCCTTCTGTGAAATTTCTTCAGCACATGTCTGGCTTGAAGCCTAAGCTTGAGAAGTTGCATCAACAAGCTGACCAGATAATGCAAAACATCATCAATGAGCATAGAGAGGCTAAGTCAAGTGCCACAGGAGACCAGGGAGAGGAGGAAGTTCTTTTAGATGTGCTCTTGAAGAAGGAGTTTGGCTTAAGTGATGAAAGTATCAAGGCTGTGATCTGGGATATCTTTGGAGGTGGAAGTGATACATCATCTGCTACCATAACATGGGCAATGGCAGAGATGATTAAAAATCCAAGAACAATGGAAAAGGTACAAACTGAGGTAAGAAGGGTATTTGATAAAGAAGGAAGGCCTAATGGAAGTGGCACAGAGAATCTAAAATATTTGAAATCTGTTGTGAGTGAGACATTAAGATTACACCCTCCAGCTCCTCTTTTGCTTCCAAGAGAATGTGGACAAGCCTGTGAGATAAACGGGTATCATATACCTGCGAAAAGCAGGGTCATAGTGAATGCTTGGGCAATTGGAAGAGATCCAAGGCTGTGGACTGAGGCTGAGAGGTTTTATCCTGAAAGGTTCATTGAAAGATCTATTGAATACAAAAGCAATAGTTTTGAGTTCATCCCATTTGGTGCTGGAAGGAGAATGTGCCCAGGCCTCACATTTGGCTTGAGCAATGTTGAGTATGTGCTTGCAATGTTGATGTATCATTTTGATTGGAAACTTCCCAAAGGAACGAAAAATGAAGATTTGGGCATGACTGAGATATTTGGAATAACAGTGGCTCGGAAAGATGATTTATATCTCATTCCCAAAACTGTTCATAATTAG 1491 0.4118 MDLQLLYFTSIFSIFIFMFMTHKIVTKKSNSTPSLPPGPWKLPIIGNMHNLVGSPLPHHRLRDLSAKYGSLMHLKLGEVSTIVVSSPEYAKEVMKTHDHIFASRPYVLAAEIMDYDFKGVAFTPYGDYWRQLRKIFALELLSSKRVQSFQPIREEVLTSFIKRMATIEGSQVNITKEVISTVFTITARTALGSKSRHHQKLISVVTEAAKISGGFDLGDLYPSVKFLQHMSGLKPKLEKLHQQADQIMQNIINEHREAKSSATGDQGEEEVLLDVLLKKEFGLSDESIKAVIWDIFGGGSDTSSATITWAMAEMIKNPRTMEKVQTEVRRVFDKEGRPNGSGTENLKYLKSVVSETLRLHPPAPLLLPRECGQACEINGYHIPAKSRVIVNAWAIGRDPRLWTEAERFYPERFIERSIEYKSNSFEFIPFGAGRRMCPGLTFGLSNVEYVLAMLMYHFDWKLPKGTKNEDLGMTEIFGITVARKDDLYLIPKTVHN* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0680 496 PANTHER CYTOCHROME P450 71B11-RELATED 8 495 - -
Gso18g0680 496 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0680 496 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0680 496 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0680 496 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0680 496 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0680 496 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0680 496 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0680 496 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0680 496 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0680 496 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0680 496 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0680 496 Coils Coil 237 257 - -
Gso18g0680 496 PANTHER CYTOCHROME P450 71D9 8 495 - -
Gso18g0680 496 Pfam Cytochrome P450 36 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0680 496 SUPERFAMILY Cytochrome P450 36 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0680 496 Gene3D Cytochrome P450 28 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0680 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0680 Gso-Chr18 7671813 7675552 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0680 11 491 Cytochrome P450 AT3G26300 40.524 4.84e-128 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0680 - K13267 gmx:100814284 967.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0680 18 7671813 7675552 Gso8g2706 8 44732277 44735114 GST