Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0679 ATGGATTTAGGTCACCAAAATATTCCCTCACTTGCAATCCTACCCTTCTTCCTCTTCATGTTCACAGTGTTTAGCTTATTTTGGAGAACAAAAACCAAGCCTTCAAACTCCAAGTTACCACCAGGACCACCAAAACTACCCCTTATAGGAAACTTGCATCAGCTTGGTGCAATGCCTCATCATGGCCTAACAAAACTTTCACACCAATATGGACCTCTCATGCACATAAAACTTGGTGCACTTTCCACCATAGTGGTGTCTTCCCCTGAAATGGCCAAGGAAGTACTGAAGACACATGACATCATTTTTGCAAATAGGCCTTATCTTCTTGCAGCAGATGTCATATCTTATGGCTCCAAGGGCATGAGTTTTTCTCCTTATGGAAGTTATTGGAGGCAGATGAGAAAGATTTGCACCTTTGAGCTGCTAACTCCGAAGCGTGTCGAATCATTTCAAGCGATTAGGGAAGAGGAGGCATCAAATCTTGTTAGAGAGATAGGTTTGGGTGAAGGGTCATCCATCAATCTCACTAGGATGATCAATTCTTTCTCCTACGGCTTAACATCACGCGTGGCCTTCGGGGGAAAGTCCAAAGATCAAGAAGCTTTCATTGATGTTATGAAAGATGTCTTGAAGGTTATTGCTGGTTTCTCCCTAGCTGACTTGTATCCTATTAAAGGGCTTCAAGTTTTGACAGGGTTGAGATCCAAAGTTGAGAAGTTACATCAAGAAGTTGATAGGATCCTTGAGAAAATTGTGAGAGACCACAGGGACACAAGTTCAGAAACAAAGGAAACCCTTGAAAAAACTGGAGAGGATCTAGTTGATGTGCTACTAAAGCTTCAGAGGCAGAACAACCTTGAGCATCCTCTATCTGACAACGTTATCAAAGCAACCATTTTGGATATCTTCAGTGCTGGAAGTGGTACTTCAGCTAAAACCTCAGAGTGGGCAATGTCAGAACTTGTAAAAAATCCAAGGGTGATGGAGAAAGCACAAGCTGAGGTAAGAAGAGTCTTTGGTGAAAAGGGGCATGTAGATGAAGCTAACCTCCATGAACTCAGCTACTTAAAGTCAGTAATCAAAGAAACGCTGCGTCTACACATTCCTGTTCCATTTTTACTACCAAGGGAATGCAGTGAAAGATGTGAAATTAACGGGTATGAAATACCAGCCAAGAGCAAGGTTATTATCAATGGTTGGGCTATTGGAAGGGATCCAAACCATTGGACTGATGCTAAGAAGTTTTGTCCAGAAAGGTTCCTTGATAGCTCAGTTGATTACAAAGGTGCAGATTTTCAGTTTATTCCATTTGGTGCTGGAAGGAGGATGTGTCCAGGAAGTGCATTTGGCATTGCTAATGTTGAACTCTTGCTAGCGAATTTGCTCTTCCATTTTGATTGGAACATGCCTAATGGGAAAAAGCCTGAAGAACTTGACATGAGTGAATCATTTGGCTTGTCAGTTAGAAGAAAACATGATTTGTATTTGATTCCTAGCATCTGTCTCTCATTTGGTAATTAA 1524 0.4154 MDLGHQNIPSLAILPFFLFMFTVFSLFWRTKTKPSNSKLPPGPPKLPLIGNLHQLGAMPHHGLTKLSHQYGPLMHIKLGALSTIVVSSPEMAKEVLKTHDIIFANRPYLLAADVISYGSKGMSFSPYGSYWRQMRKICTFELLTPKRVESFQAIREEEASNLVREIGLGEGSSINLTRMINSFSYGLTSRVAFGGKSKDQEAFIDVMKDVLKVIAGFSLADLYPIKGLQVLTGLRSKVEKLHQEVDRILEKIVRDHRDTSSETKETLEKTGEDLVDVLLKLQRQNNLEHPLSDNVIKATILDIFSAGSGTSAKTSEWAMSELVKNPRVMEKAQAEVRRVFGEKGHVDEANLHELSYLKSVIKETLRLHIPVPFLLPRECSERCEINGYEIPAKSKVIINGWAIGRDPNHWTDAKKFCPERFLDSSVDYKGADFQFIPFGAGRRMCPGSAFGIANVELLLANLLFHFDWNMPNGKKPEELDMSESFGLSVRRKHDLYLIPSICLSFGN* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0679 507 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 9 503 - -
Gso18g0679 507 Pfam Cytochrome P450 40 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0679 507 PANTHER CYTOCHROME P450 71B11-RELATED 9 503 - -
Gso18g0679 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Gso18g0679 507 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0679 507 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0679 507 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0679 507 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0679 507 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0679 507 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0679 507 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0679 507 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0679 507 SUPERFAMILY Cytochrome P450 38 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0679 507 Coils Coil 231 251 - -
Gso18g0679 507 Gene3D Cytochrome P450 26 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0679 507 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0679 507 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0679 507 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0679 Gso-Chr18 7662579 7665729 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0679 13 501 Cytochrome P450 AT5G25120 42.369 8.36e-140 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0679 - - gmx:100818000 982.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0679 18 7662579 7665729 Gso8g2709 8 44751840 44754162 GST