Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0678 ATGGATCTTCAAACCCTCTACTTCACATCCATTTTATCCATTTTCATTTTTATGTTTTTGGGGCACAAAATAATTACAAAGAAACCTGCCTCAACTCCAAATTTACCACCAGGGCCTTGGAAGATACCTATCATAGGGAACATACACAACGTTGTTGGCTCACTTCCCCATCATCGGCTAAGAGATTTATCAGCAAAATATGGACCCTTGATGCATCTGAAGCTTGGAGAGGTTTCCACCATTGTGGTTTCATCCCCAGAGTATGCTAAAGAGGTGTTAAGCACCCATGATCTTATCTTTTCATCAAGACCTCCAATACTAGCTTCAAAGATAATGTCTTATGATTCTATGGGTATGTCTTTTGCACCTTATGGTGATTACTGGAGACGGCTAAGAAAGATTTGTGCATCGGAGCTATTAAGCTCAAAACGAGTCCAATCTTTCCAACCAATCCGAGGGGAAGAGCTCACCAACTTCATCAAAAGGATTGCTTCAAAAGAAGGGTCACCCATCAATCTCACCAAAGAAGTGCTTTTAACAGTATCTACAATTGTTTCAAGGACAGCCCTTGGCAACAAGTGTAGGGACCATAAAAAATTCATATCAGCTGTAAGGGAAGCCACAGAGGCTGCTGGAGGTTTTGACTTGGGAGATTTGTACCCTTCTGCTGAATGGCTTCAACACATCTCAGGGCTGAAGCCTAAGCTTGAGAAGTATCATCAACAAGCCGACCGGATAATGCAAAACATCGTCAATGAACATAGAGAGGCTAAGTCAAGTGCCACACACGGCCAGGGTGAAGAAGTGGCGGATGATCTTGTAGACGTGCTCATGAAGGAGGAGTTTGGCTTAAGCGACAATAGTATCAAGGCTGTGATTTTGGATATGTTTGGAGGTGGAACTCAGACATCATCTACTACCATAACATGGGCAATGGCAGAGATGATAAAAAATCCAAGAGTAATGAAAAAGGTACATGCTGAGGTAAGAGAGGTATTTGGTGGTAAAGTAGGACACCCCGATGAAAGTGACATGGAGAATCTAAAATATTTGAAATCTGTTGTGAAAGAGACATTGAGACTGCACCCTCCTGGTCCCCTTTTGCTTCCAAGACAGTGTGGACAAGCTTGTGAGATCAATGGTTATTACATACCTATCAAAAGCAAGGTCATAATCAATGCATGGGCAATTGGAAGAGATCCAAATCATTGGAGTGAAGCTGAGAGATTTTATCCTGAGAGGTTCATTGGAAGTTCTGTTGACTACCAAGGCAATAGTTTTGAGTACATACCATTTGGTGCTGGAAGAAGAATATGCCCTGGCCTCACATTTGGGTTGACCAATGTTGAGTTTCCACTTGCATTGCTAATGTATTATTTTGATTGGAAACTTCCCAATGAAATGAAGAATGAAGATTTGGACATGACTGAGGCTTTTGGAGTATCAGCTCGTAGAAAAGATGATTTGTGCCTCATTCCTATCACTTTCCATCTTTAG 1497 0.4168 MDLQTLYFTSILSIFIFMFLGHKIITKKPASTPNLPPGPWKIPIIGNIHNVVGSLPHHRLRDLSAKYGPLMHLKLGEVSTIVVSSPEYAKEVLSTHDLIFSSRPPILASKIMSYDSMGMSFAPYGDYWRRLRKICASELLSSKRVQSFQPIRGEELTNFIKRIASKEGSPINLTKEVLLTVSTIVSRTALGNKCRDHKKFISAVREATEAAGGFDLGDLYPSAEWLQHISGLKPKLEKYHQQADRIMQNIVNEHREAKSSATHGQGEEVADDLVDVLMKEEFGLSDNSIKAVILDMFGGGTQTSSTTITWAMAEMIKNPRVMKKVHAEVREVFGGKVGHPDESDMENLKYLKSVVKETLRLHPPGPLLLPRQCGQACEINGYYIPIKSKVIINAWAIGRDPNHWSEAERFYPERFIGSSVDYQGNSFEYIPFGAGRRICPGLTFGLTNVEFPLALLMYYFDWKLPNEMKNEDLDMTEAFGVSARRKDDLCLIPITFHL* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0678 498 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0678 498 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0678 498 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0678 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Gso18g0678 498 Gene3D Cytochrome P450 29 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0678 498 SUPERFAMILY Cytochrome P450 36 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0678 498 Pfam Cytochrome P450 36 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0678 498 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0678 498 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0678 498 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0678 498 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0678 498 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0678 498 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0678 498 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0678 498 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g0678 498 PANTHER CYTOCHROME P450 71B11-RELATED 8 497 - -
Gso18g0678 498 PANTHER CYTOCHROME P450 71D9 8 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0678 Gso-Chr18 7636525 7639069 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0678 14 496 Cytochrome P450 AT3G26300 42.570 2.79e-135 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0678 - K13267 gmx:100813216 996.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0678 18 7636525 7639069 Gso8g2795 8 45728258 45730039 GST